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Pilrb2l3 paired immunoglobin like type 2 receptor beta 2 like 3 [ Rattus norvegicus (Norway rat) ]

Gene ID: 498169, updated on 17-Aug-2024

Summary

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Official Symbol
Pilrb2l3provided by RGD
Official Full Name
paired immunoglobin like type 2 receptor beta 2 like 3provided by RGD
Primary source
RGD:1561730
See related
EnsemblRapid:ENSRNOG00000048881 AllianceGenome:RGD:1561730
Gene type
protein coding
RefSeq status
MODEL
Organism
Rattus norvegicus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Rattus
Also known as
RGD1561730
Summary
Predicted to be integral component of membrane. Orthologous to human PILRA (paired immunoglobin like type 2 receptor alpha) and PILRB (paired immunoglobin like type 2 receptor beta). [provided by Alliance of Genome Resources, Apr 2022]
Expression
Biased expression in Spleen (RPKM 19.1), Lung (RPKM 15.3) and 8 other tissues See more
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Genomic context

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See Pilrb2l3 in Genome Data Viewer
Location:
12q12
Exon count:
6
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCr8 (GCF_036323735.1) 12 NC_086030.1 (23125397..23132038, complement)
RS_2023_06 previous assembly mRatBN7.2 (GCF_015227675.2) 12 NC_051347.1 (18210535..18216471, complement)
106 previous assembly Rnor_6.0 (GCF_000001895.5) 12 NC_005111.4 (20592922..20660658, complement)

Chromosome 12 - NC_086030.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC134481165 Neighboring gene paired immunoglobulin-like type 2 receptor beta Neighboring gene paired immunoglobulin-like type 2 receptor beta Neighboring gene transfer RNA glycine (anticodon ACC) 1

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Expression

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  • Project title: A rat RNA-Seq transcriptomic BodyMap across 11 organs and 4 developmental stages A rat RNA-Seq transcriptomic BodyMap across 11 organs and 4 developmental stages
  • Description: 320 RNA samples isolated from 11 organs (adrenal gland, brain, heart, kidney, liver, lung, muscle, spleen, thymus, and testes or uterus) from both sexes of Fischer 344 rats across four developmental stages (2-, 6-, 21-, and 104-weeks-old)
  • BioProject: PRJNA238328
  • Publication: PMID 24510058
  • Analysis date: Mon Jun 6 17:44:12 2016

Bibliography

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Related articles in PubMed

  1. Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Gaudet P, et al. Brief Bioinform, 2011 Sep. PMID 21873635, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RGD

Component Evidence Code Pubs
located_in cell periphery IEA
Inferred from Electronic Annotation
more info
  
located_in membrane IEA
Inferred from Electronic Annotation
more info
  

General protein information

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Preferred Names
paired immunoglobulin-like type 2 receptor beta; paired immunoglobulin-like type 2 receptor beta-2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_036323735.1-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCr8

Genomic

  1. NC_086030.1 Reference GRCr8

    Range
    23125397..23132038 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_008769088.4 → XP_008767310.1  paired immunoglobulin-like type 2 receptor beta isoform X1

    See identical proteins and their annotated locations for XP_008767310.1

    UniProtKB/TrEMBL
    A0A8I5ZX13, A0A8I6ABT8
    Related
    ENSRNOP00000090856.1, ENSRNOT00000098725.2
    Conserved Domains (1) summary
    cl11960
    Location:32 → 144
    Ig; Immunoglobulin domain

  2. XM_006249057.5 → XP_006249119.1  paired immunoglobulin-like type 2 receptor beta isoform X2

    See identical proteins and their annotated locations for XP_006249119.1

    UniProtKB/TrEMBL
    A0A8I5ZX13, A0A8I6APL2
    Related
    ENSRNOP00000090991.1, ENSRNOT00000119260.2
    Conserved Domains (1) summary
    cl11960
    Location:32 → 144
    Ig; Immunoglobulin domain

  3. XM_039090015.2 → XP_038945943.1  paired immunoglobulin-like type 2 receptor beta-2 isoform X3

Nucleotide Protein Strain
Heading Accession and Version

Gene LinkOut

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