U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Fam78b family with sequence similarity 78, member B [ Rattus norvegicus (Norway rat) ]

Gene ID: 498269, updated on 10-Jul-2024

Summary

Symbol
Fam78bprovided by RGD
Full Name
family with sequence similarity 78, member Bprovided by RGD
Primary source
RGD:1564387
See related
EnsemblRapid:ENSRNOG00000068017 AllianceGenome:RGD:1564387
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Rattus norvegicus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Rattus
Also known as
RGD1564387
Summary
Orthologous to human FAM78B (family with sequence similarity 78 member B). [provided by Alliance of Genome Resources, Apr 2022]
Orthologs
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

See Fam78b in Genome Data Viewer
Location:
13q23-q24
Exon count:
3
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCr8 (GCF_036323735.1) 13 NC_086031.1 (81695329..81783881)
RS_2023_06 previous assembly mRatBN7.2 (GCF_015227675.2) 13 NC_051348.1 (79162393..79250958)
106 previous assembly Rnor_6.0 (GCF_000001895.5) 13 NC_005112.4 (85110536..85233243)

Chromosome 13 - NC_086031.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC134481528 Neighboring gene uncharacterized LOC108352566 Neighboring gene ribosomal protein L29, pseudogene 20 Neighboring gene small nucleolar RNA U13

Genomic regions, transcripts, and products

NCBI Reference Sequences (RefSeq)

NEW Try the new Transcript table

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001398658.1NP_001385587.1  protein FAM78B

    Status: VALIDATED

    Source sequence(s)
    JAXUCZ010000013
    UniProtKB/TrEMBL
    A0A8I6AGD7
    Related
    ENSRNOP00000093749.1, ENSRNOT00000115415.2

RNA

  1. NR_174119.1 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    JAXUCZ010000013

RefSeqs of Annotated Genomes: GCF_036323735.1-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCr8

Genomic

  1. NC_086031.1 Reference GRCr8

    Range
    81695329..81783881
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)