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Mrps24 mitochondrial ribosomal protein S24 [ Rattus norvegicus (Norway rat) ]

Gene ID: 498406, updated on 17-Aug-2024

Summary

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Official Symbol
Mrps24provided by RGD
Official Full Name
mitochondrial ribosomal protein S24provided by RGD
Primary source
RGD:1306014
See related
AllianceGenome:RGD:1306014
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Rattus norvegicus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Rattus
Also known as
DD6A4-3
Summary
Predicted to be located in mitochondrion and ribosome. Orthologous to human MRPS24 (mitochondrial ribosomal protein S24). [provided by Alliance of Genome Resources, Apr 2022]
Expression
Biased expression in Heart (RPKM 199.3), Muscle (RPKM 168.1) and 9 other tissues See more
Orthologs
human mouse all
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Genomic context

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See Mrps24 in Genome Data Viewer
Location:
14q21
Exon count:
4
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCr8 (GCF_036323735.1) 14 NC_086032.1 (84798649..84802777, complement)
RS_2023_06 previous assembly mRatBN7.2 (GCF_015227675.2) 14 NC_051349.1 (80584671..80588801, complement)
106 previous assembly Rnor_6.0 (GCF_000001895.5) 14 NC_005113.4 (85947763..85951891, complement)

Chromosome 14 - NC_086032.1Genomic Context describing neighboring genes Neighboring gene ankyrin repeat domain 36 Neighboring gene KAT8 regulatory NSL complex subunit 2, pseudogene 4 Neighboring gene ribosomal protein L18, pseudogene 8 Neighboring gene upregulator of cell proliferation Neighboring gene ubiquitin-conjugating enzyme E2D 4 like, pseudogene 2

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Expression

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  • Project title: A rat RNA-Seq transcriptomic BodyMap across 11 organs and 4 developmental stages A rat RNA-Seq transcriptomic BodyMap across 11 organs and 4 developmental stages
  • Description: 320 RNA samples isolated from 11 organs (adrenal gland, brain, heart, kidney, liver, lung, muscle, spleen, thymus, and testes or uterus) from both sexes of Fischer 344 rats across four developmental stages (2-, 6-, 21-, and 104-weeks-old)
  • BioProject: PRJNA238328
  • Publication: PMID 24510058
  • Analysis date: Mon Jun 6 17:44:12 2016

Bibliography

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Related articles in PubMed

  1. The mRNA-bound proteome and its global occupancy profile on protein-coding transcripts. Baltz AG, et al. Mol Cell, 2012 Jun 8. PMID 22681889
  2. A mitochondrial protein compendium elucidates complex I disease biology. Pagliarini DJ, et al. Cell, 2008 Jul 11. PMID 18614015, Free PMC Article
  3. Insights into RNA biology from an atlas of mammalian mRNA-binding proteins. Castello A, et al. Cell, 2012 Jun 8. PMID 22658674
  4. Normalization and subtraction: two approaches to facilitate gene discovery. Bonaldo MF, et al. Genome Res, 1996 Sep. PMID 8889548
  5. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. Strausberg RL, et al. Proc Natl Acad Sci U S A, 2002 Dec 24. PMID 12477932, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Gene Ontology Provided by RGD

Component Evidence Code Pubs
located_in mitochondrion IEA
Inferred from Electronic Annotation
more info
  
located_in ribosome IEA
Inferred from Electronic Annotation
more info
  

General protein information

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Preferred Names
small ribosomal subunit protein uS3m
Names
28S ribosomal protein S24, mitochondrial
NP_001071127.1

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001077659.1 → NP_001071127.1  small ribosomal subunit protein uS3m

    See identical proteins and their annotated locations for NP_001071127.1

    Status: VALIDATED

    Source sequence(s)
    AI577236, BP503351, DY319747
    UniProtKB/TrEMBL
    A6IKN0, A9UMV2
    Conserved Domains (1) summary
    pfam14955
    Location:36 → 167
    MRP-S24; Mitochondrial ribosome subunit S24

RefSeqs of Annotated Genomes: GCF_036323735.1-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCr8

Genomic

  1. NC_086032.1 Reference GRCr8

    Range
    84798649..84802777 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein Strain
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

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