Dnaaf10 dynein axonemal assembly factor 10 [Rattus norvegicus (Norway rat)] - Gene

Summary

Official Symbol: Dnaaf10provided by RGD
Official Full Name: dynein axonemal assembly factor 10provided by RGD
Primary source: RGD:1563863
See related: EnsemblRapid:ENSRNOG00000085590 AllianceGenome:RGD:1563863
Gene type: protein coding
RefSeq status: PROVISIONAL
Organism: Rattus norvegicus
Lineage: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Rattus
Also known as: Wdr92; RGD1563863
Summary: Predicted to enable ubiquitin binding activity. Predicted to be part of RPAP3/R2TP/prefoldin-like complex. Orthologous to human DNAAF10 (dynein axonemal assembly factor 10). [provided by Alliance of Genome Resources, Nov 2024]
Expression: Biased expression in Thymus (RPKM 69.3), Lung (RPKM 53.2) and 9 other tissues See more
Orthologs: human mouse all
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Genomic context

Location:: 14q22

Exon count:: 10

Annotation release	Status	Assembly	Chr	Location
RS_2024_02	current	GRCr8 (GCF_036323735.1)	14	NC_086032.1 (95820272..95841449)
RS_2023_06	previous assembly	mRatBN7.2 (GCF_015227675.2)	14	NC_051349.1 (91618649..91639828)
106	previous assembly	Rnor_6.0 (GCF_000001895.5)	14	NC_005113.4 (100373129..100394143)

Chromosome 14 - NC_086032.1 Genomic Context describing neighboring genes

Genomic regions, transcripts, and products

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Genomic Sequence:

Go to nucleotide: Graphics FASTA GenBank

Expression

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See details

Project title: A rat RNA-Seq transcriptomic BodyMap across 11 organs and 4 developmental stages A rat RNA-Seq transcriptomic BodyMap across 11 organs and 4 developmental stages
Description: 320 RNA samples isolated from 11 organs (adrenal gland, brain, heart, kidney, liver, lung, muscle, spleen, thymus, and testes or uterus) from both sexes of Fischer 344 rats across four developmental stages (2-, 6-, 21-, and 104-weeks-old)
BioProject: PRJNA238328
Publication: PMID 24510058
Analysis date: Mon Jun 6 17:44:12 2016

Bibliography

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GeneRIFs: Gene References Into Functions

What's a GeneRIF?

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General gene information

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Markers

RH133644 (e-PCR)
- UniSTS:216927

BI277192 (e-PCR)
- UniSTS:243625

Gene Ontology Provided by RGD

Function	Evidence Code	Pubs
enables ubiquitin binding	IBA Inferred from Biological aspect of Ancestor more info

Component	Evidence Code	Pubs
part_of RPAP3/R2TP/prefoldin-like complex	ISO Inferred from Sequence Orthology more info

General protein information

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Preferred Names: dynein axonemal assembly factor 10

Names: WD repeat domain 92; WD repeat-containing protein 92

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

NM_001127559.2 → NP_001121031.1 dynein axonemal assembly factor 10

See identical proteins and their annotated locations for NP_001121031.1

Status: PROVISIONAL

Source sequence(s)

BC162042

UniProtKB/TrEMBL

B1WC85

Related

ENSRNOP00000101946.1, ENSRNOT00000137320.1

Conserved Domains (2) summary

sd00039
Location:21 → 64

7WD40; WD40 repeat [structural motif]

cl29593
Location:21 → 348

WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...