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Hmgb2-ps6 high mobility group box 2, pseudogene 6 [ Rattus norvegicus (Norway rat) ]

Gene ID: 498988, updated on 2-Nov-2024

Summary

Official Symbol
Hmgb2-ps6provided by RGD
Official Full Name
high mobility group box 2, pseudogene 6provided by RGD
Primary source
RGD:1559962
See related
AllianceGenome:RGD:1559962
Gene type
pseudo
RefSeq status
INFERRED
Organism
Rattus norvegicus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Rattus
Also known as
RGD1559962
Summary
Predicted to enable DNA binding activity, bending. Predicted to be involved in regulation of transcription by RNA polymerase II. Orthologous to human HMGB2 (high mobility group box 2). [provided by Alliance of Genome Resources, Nov 2024]
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Genomic context

See Hmgb2-ps6 in Genome Data Viewer
Location:
1p12
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCr8 (GCF_036323735.1) 1 NC_086019.1 (21228484..21229582, complement)
RS_2023_06 previous assembly mRatBN7.2 (GCF_015227675.2) 1 NC_051336.1 (19409161..19410260, complement)
106 previous assembly Rnor_6.0 (GCF_000001895.5) 1 NC_005100.4 (20416735..20417959, complement)

Chromosome 1 - NC_086019.1Genomic Context describing neighboring genes Neighboring gene ribosomal protein S10 like 2 Neighboring gene tumor protein, translationally-controlled 1 like 3 Neighboring gene sterile alpha motif domain containing 3 Neighboring gene transmembrane protein 200A Neighboring gene RNA, U11 small nuclear 3 Neighboring gene uncharacterized LOC120098808 Neighboring gene uncharacterized LOC134482582

Genomic regions, transcripts, and products

General gene information

Other Names

  • high mobility group protein B2

Gene Ontology Provided by RGD

Function Evidence Code Pubs
enables DNA binding, bending IBA
Inferred from Biological aspect of Ancestor
more info
 
Process Evidence Code Pubs
involved_in biological_process ND
No biological Data available
more info
 
involved_in regulation of transcription by RNA polymerase II IBA
Inferred from Biological aspect of Ancestor
more info
 

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

Genomic

  1. NG_081571.2 

    Range
    101..1199
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RefSeqs of Annotated Genomes: GCF_036323735.1-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCr8

Genomic

  1. NC_086019.1 Reference GRCr8

    Range
    21228484..21229582 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)