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An18g03310 uncharacterized protein [ Aspergillus niger ]

Gene ID: 4989893, updated on 31-Oct-2024

Summary

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Gene symbol
An18g03310
Gene description
uncharacterized protein
Locus tag
An18g03310
See related
FungiDB:An18g03310; VEuPathDB:An18g03310
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Aspergillus niger
Lineage
Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina; Eurotiomycetes; Eurotiomycetidae; Eurotiales; Aspergillaceae; Aspergillus; Aspergillus subgen. Circumdati
Orthologs
Aspergillus fumigatus all
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Genomic context

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See An18g03310 in Genome Data Viewer
Location:
chromosome: VIII, map: unlocalized, clone: An18
Exon count:
3

NT_166533.1Genomic Context describing neighboring genes Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NT_166533.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Genome sequencing and analysis of the versatile cell factory Aspergillus niger CBS 513.88. Pel HJ, et al. Nat Biotechnol, 2007 Feb. PMID 17259976
  2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables RNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables structural constituent of ribosome IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in translation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of cytosolic small ribosomal subunit IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
uncharacterized protein
XP_001398791.1
  • Function: the S. cerevisiae Rps3 protein is component of the yeast cytosolic 40S ribosomal subunit.;
    Remark: alternate name for S. cerevisiae Rps3: Suf14, ribosomal protein S3(rp13)(S3), YNL178W.;
    Title: strong similarity to cytoplasmic ribosomal protein of the small subunit S3 - Saccharomyces cerevisiae;
    cytoplasm;
    See PMID 8670293

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NT_166533.1 Reference assembly

    Range
    740333..741610 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_001398754.3 → XP_001398791.1  uncharacterized protein An18g03310 [Aspergillus niger]

    See identical proteins and their annotated locations for XP_001398791.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    A0A100IN64, A0A319A9C5, A0A370CFH3, A2RAI9, G3YDX2
    Conserved Domains (1) summary
    PTZ00084
    Location:5 → 222
    PTZ00084; 40S ribosomal protein S3; Provisional
Nucleotide Protein
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