U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

An18g04310 uncharacterized protein [ Aspergillus niger ]

Gene ID: 4989996, updated on 31-Oct-2024

Summary

Go to the top of the page Help
Gene symbol
An18g04310
Gene description
uncharacterized protein
Locus tag
An18g04310
See related
FungiDB:An18g04310; VEuPathDB:An18g04310
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Aspergillus niger
Lineage
Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina; Eurotiomycetes; Eurotiomycetidae; Eurotiales; Aspergillaceae; Aspergillus; Aspergillus subgen. Circumdati
Orthologs
Aspergillus fumigatus all
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
See An18g04310 in Genome Data Viewer
Location:
chromosome: VIII, map: unlocalized, clone: An18
Exon count:
3

NT_166533.1Genomic Context describing neighboring genes Neighboring gene hypothetical protein Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein

Genomic regions, transcripts, and products

Go to the top of the page Help
Genomic Sequence:
NT_166533.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

Related articles in PubMed

  1. Genome sequencing and analysis of the versatile cell factory Aspergillus niger CBS 513.88. Pel HJ, et al. Nat Biotechnol, 2007 Feb. PMID 17259976
  2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables structural constituent of ribosome IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in translation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of cytosolic small ribosomal subunit IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in ribosome IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
uncharacterized protein
XP_001398890.1
  • Title: strong similarity to cytoplasmic ribosomal protein of the small subunit S12 - Sus scrofa;
    cytoplasm;
    See PMID 7622064

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NT_166533.1 Reference assembly

    Range
    1010431..1011056
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_001398853.3 → XP_001398890.1  uncharacterized protein An18g04310 [Aspergillus niger]

    See identical proteins and their annotated locations for XP_001398890.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    A0A124BY40, A2RAT8
    Conserved Domains (1) summary
    pfam01248
    Location:34 → 129
    Ribosomal_L7Ae; Ribosomal protein L7Ae/L30e/S12e/Gadd45 family
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

Molecular Biology Databases
Research Materials