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An18g06440 uncharacterized protein [ Aspergillus niger ]

Gene ID: 4990212, updated on 31-Oct-2024

Summary

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Gene symbol
An18g06440
Gene description
uncharacterized protein
Locus tag
An18g06440
See related
FungiDB:An18g06440; VEuPathDB:An18g06440
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Aspergillus niger
Lineage
Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina; Eurotiomycetes; Eurotiomycetidae; Eurotiales; Aspergillaceae; Aspergillus; Aspergillus subgen. Circumdati
Orthologs
Aspergillus fumigatus all
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Genomic context

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See An18g06440 in Genome Data Viewer
Location:
chromosome: VIII, map: unlocalized, clone: An18
Exon count:
1

NT_166533.1Genomic Context describing neighboring genes Neighboring gene hypothetical protein Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NT_166533.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Genome sequencing and analysis of the versatile cell factory Aspergillus niger CBS 513.88. Pel HJ, et al. Nat Biotechnol, 2007 Feb. PMID 17259976
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Component Evidence Code Pubs
located_in Golgi apparatus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
uncharacterized protein
XP_001399097.1
  • Localization: Yip3 is selectively and efficiently packaged into COPII vesicles.;
    Remark: cytosolic coat proteins (COPII) direct the formation of transport vesicles.;
    Remark: the synonym for Yip3 from S. cerevisiae is YNL044w.;
    Title: strong similarity to COPII vesicle component Yip3 - Saccharomyces cerevisiae;
    intracellular transport vesicles;
    See PMID 11157978

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NT_166533.1 Reference assembly

    Range
    1459530..1460051 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_001399060.3 → XP_001399097.1  uncharacterized protein An18g06440 [Aspergillus niger]

    See identical proteins and their annotated locations for XP_001399097.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    A0A100INL0, A0A319AMB5, A0A370C9X9, A2RBE5, G3YEK6
    Conserved Domains (1) summary
    cl02137
    Location:1 → 173
    PRA1; PRA1 family protein
Nucleotide Protein
Heading Accession and Version

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Molecular Biology Databases
Research Materials