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An04g01800 uncharacterized protein [ Aspergillus niger ]

Gene ID: 4990585, updated on 31-Oct-2024

Summary

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Gene symbol
An04g01800
Gene description
uncharacterized protein
Locus tag
An04g01800
See related
FungiDB:An04g01800; VEuPathDB:An04g01800
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Aspergillus niger
Lineage
Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina; Eurotiomycetes; Eurotiomycetidae; Eurotiales; Aspergillaceae; Aspergillus; Aspergillus subgen. Circumdati
Orthologs
Aspergillus fumigatus all
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Genomic context

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See An04g01800 in Genome Data Viewer
Location:
chromosome: VI, map: unlocalized, clone: An04
Exon count:
4

NT_166539.1Genomic Context describing neighboring genes Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NT_166539.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Genome sequencing and analysis of the versatile cell factory Aspergillus niger CBS 513.88. Pel HJ, et al. Nat Biotechnol, 2007 Feb. PMID 17259976
  2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in proteasome-mediated ubiquitin-dependent protein catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of proteasome core complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of proteasome core complex, beta-subunit complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
uncharacterized protein
XP_001401548.1
  • Localization: PUP3 of S. cerevisiae is cytoplasmic and nuclear.;
    Remark: PUP3 of S. cerevisiae is also known as SCS32 and has a systematic name of YER094C.;
    Title: strong similarity to proteasome 20S subunit Pup3 - Saccharomyces cerevisiae;
    See PMID 9207060;
    See PMID 9278475;
    See PMID 10500111

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NT_166539.1 Reference assembly

    Range
    469155..469975 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_001401511.3 → XP_001401548.1  uncharacterized protein An04g01800 [Aspergillus niger]

    See identical proteins and their annotated locations for XP_001401548.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    A0A117DX69, A0A319AY52, A0A370C519, A2QI02
    Conserved Domains (1) summary
    cd03759
    Location:8 → 202
    proteasome_beta_type_3; proteasome beta type-3 subunit. The 20S proteasome, multisubunit proteolytic complex, is the central enzyme of nonlysosomal protein degradation in both the cytosol and nucleus. It is composed of 28 subunits arranged as four homoheptameric rings that ...
Nucleotide Protein
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