U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

An04g05860 uncharacterized protein [ Aspergillus niger ]

Gene ID: 4990995, updated on 31-Oct-2024

Summary

Go to the top of the page Help
Gene symbol
An04g05860
Gene description
uncharacterized protein
Locus tag
An04g05860
See related
FungiDB:An04g05860; VEuPathDB:An04g05860
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Aspergillus niger
Lineage
Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina; Eurotiomycetes; Eurotiomycetidae; Eurotiales; Aspergillaceae; Aspergillus; Aspergillus subgen. Circumdati
Orthologs
Aspergillus fumigatus all
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
See An04g05860 in Genome Data Viewer
Location:
chromosome: VI, map: unlocalized, clone: An04
Exon count:
4

NT_166539.1Genomic Context describing neighboring genes Neighboring gene uncharacterized protein Neighboring gene hypothetical protein Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein

Genomic regions, transcripts, and products

Go to the top of the page Help
Genomic Sequence:
NT_166539.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

Related articles in PubMed

  1. Genome sequencing and analysis of the versatile cell factory Aspergillus niger CBS 513.88. Pel HJ, et al. Nat Biotechnol, 2007 Feb. PMID 17259976
  2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables magnesium ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables ribose phosphate diphosphokinase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in 5-phosphoribose 1-diphosphate biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in purine nucleotide biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in ribonucleoside monophosphate biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of ribose phosphate diphosphokinase complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
uncharacterized protein
XP_001401952.1
  • Catalytic activity: ribose-phosphate pyrophosphokinases convert ATP + D-ribose 5-phosphate to AMP + 5-phospho-alpha-D-ribose 1-diphosphate.;
    Complex: by genetic interaction and two-hybrid PRS family members form functional complexes, e. g. PRS2 with PRS5.;
    Function: S. cerevisiae phosphoribosyl-pyrophosphate (PRPP) is required for purine, pyrimidine, tryptophan and histidine biosynthesis.;
    Function: in S. cerevisiae disruption of PRS1 or PRS3 has a significant effect on cell metabolism, whereas disruption of PRS2 or PRS4 has little measurable effect.;
    Remark: the Exon-Intron structure of the predicted A. niger protein is in accordance with the A. niger EST an_3596.;
    Remark: the PRS gene family in S. cerevisiae consists of five genes each capable of encoding a 5-phosphoribosyl-1(alpha)-pyrophosphate synthetase polypeptide.;
    Title: strong similarity to ribose-phosphate pyrophosphokinase Prs2 - Saccharomyces cerevisiae;
    see citation in PMID 7992503;
    see citation in PMID 9108276;
    see citation in PMID 10212224

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NT_166539.1 Reference assembly

    Range
    1451202..1452378 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_001401915.1 → XP_001401952.1  uncharacterized protein An04g05860 [Aspergillus niger]

    See identical proteins and their annotated locations for XP_001401952.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    A0A117DZ69, A0A319AGL4, A0A370C0M1, A2QJ56, G3Y9G3
    Conserved Domains (1) summary
    COG0462
    Location:4 → 315
    PrsA; Phosphoribosylpyrophosphate synthetase [Nucleotide transport and metabolism, Amino acid transport and metabolism]
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

Molecular Biology Databases
Research Materials