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An04g06190 uncharacterized protein [ Aspergillus niger ]

Gene ID: 4991025, updated on 31-Oct-2024

Summary

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Gene symbol
An04g06190
Gene description
uncharacterized protein
Locus tag
An04g06190
See related
FungiDB:An04g06190; VEuPathDB:An04g06190
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Aspergillus niger
Lineage
Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina; Eurotiomycetes; Eurotiomycetidae; Eurotiales; Aspergillaceae; Aspergillus; Aspergillus subgen. Circumdati
Orthologs
Aspergillus fumigatus all
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Genomic context

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See An04g06190 in Genome Data Viewer
Location:
chromosome: VI, map: unlocalized, clone: An04
Exon count:
1

NT_166539.1Genomic Context describing neighboring genes Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NT_166539.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Genome sequencing and analysis of the versatile cell factory Aspergillus niger CBS 513.88. Pel HJ, et al. Nat Biotechnol, 2007 Feb. PMID 17259976
  2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables structural constituent of ribosome IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in translation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of large ribosomal subunit IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in mitochondrion IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
uncharacterized protein
XP_001401982.1
  • Remark: an alternative name for S. cerevisiae MRPL33 is YML33.;
    Title: strong similarity to mitochondrial ribosomal protein of the large subunit L30 - Saccharomyces cerevisiae;
    localisation:mitochondrion;
    see citation in PMID 2061283

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NT_166539.1 Reference assembly

    Range
    1534976..1535263
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_001401945.3 → XP_001401982.1  uncharacterized protein An04g06190 [Aspergillus niger]

    See identical proteins and their annotated locations for XP_001401982.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    A0A100IB79, A0A319AGI9, A0A370BG23, A0A505I2U1, A2QJ86, G3Y9I9
    Conserved Domains (1) summary
    cd01658
    Location:5 → 58
    Ribosomal_L30; Ribosomal protein L30, which is found in eukaryotes and prokaryotes but not in archaea, is one of the smallest ribosomal proteins with a molecular mass of about 7kDa. L30 binds the 23SrRNA as well as the 5S rRNA and is one of five ribosomal proteins that ...
Nucleotide Protein
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