Asprv1 aspartic peptidase, retroviral-like 1 [Rattus norvegicus (Norway rat)] - Gene

Summary

Official Symbol: Asprv1provided by RGD
Official Full Name: aspartic peptidase, retroviral-like 1provided by RGD
Primary source: RGD:1560859
See related: EnsemblRapid:ENSRNOG00000017710 AllianceGenome:RGD:1560859
Gene type: protein coding
RefSeq status: VALIDATED
Organism: Rattus norvegicus
Lineage: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Rattus
Also known as: RGD1560859
Summary: Predicted to enable aspartic-type endopeptidase activity. Predicted to be involved in protein processing and skin development. Orthologous to human ASPRV1 (aspartic peptidase retroviral like 1). [provided by Alliance of Genome Resources, Nov 2024]
Orthologs: human mouse all
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Genomic context

Location:: 4q34

Exon count:: 1

Annotation release	Status	Assembly	Chr	Location
RS_2024_02	current	GRCr8 (GCF_036323735.1)	4	NC_086022.1 (120634793..120636265)
RS_2023_06	previous assembly	mRatBN7.2 (GCF_015227675.2)	4	NC_051339.1 (119077415..119078887)
106	previous assembly	Rnor_6.0 (GCF_000001895.5)	4	NC_005103.4 (118431755..118433286)

Chromosome 4 - NC_086022.1 Genomic Context describing neighboring genes

Genomic regions, transcripts, and products

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Genomic Sequence:

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

What's a GeneRIF?

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General gene information

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Markers

RH143304 (e-PCR)
- UniSTS:232551

BI278425 (e-PCR)
- UniSTS:244378

A006T05 (e-PCR)
- UniSTS:22959

RH128872 (e-PCR)
- UniSTS:212180

Gene Ontology Provided by RGD

Function	Evidence Code	Pubs
enables aspartic-type endopeptidase activity	ISO Inferred from Sequence Orthology more info

Process	Evidence Code	Pubs
involved_in protein processing	ISO Inferred from Sequence Orthology more info
involved_in skin development	ISO Inferred from Sequence Orthology more info

General protein information

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Preferred Names: retroviral-like aspartic protease 1

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

NM_001399078.1 → NP_001386007.1 retroviral-like aspartic protease 1

Status: VALIDATED

Source sequence(s)

JAXUCZ010000004

UniProtKB/TrEMBL

A6IAY5

Related

ENSRNOP00000104522.1, ENSRNOT00000023814.7

Conserved Domains (1) summary

cd00303
Location:113 → 205

retropepsin_like; Retropepsins; pepsin-like aspartate proteases