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Smco3 single-pass membrane protein with coiled-coil domains 3 [ Rattus norvegicus (Norway rat) ]

Gene ID: 500352, discontinued on 31-Mar-2021

Summary

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Official Symbol
Smco3provided by RGD
Official Full Name
single-pass membrane protein with coiled-coil domains 3provided by RGD
Primary source
RGD:1560652
Gene type
protein coding
Organism
Rattus norvegicus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Rattus
Also known as
RGD1560652
Expression
Biased expression in Lung (RPKM 33.2), Spleen (RPKM 21.2) and 8 other tissues See more
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Genomic context

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See Smco3 in Genome Data Viewer
Location:
4q43
Exon count:
2
Annotation release Status Assembly Chr Location
106 latest, but not current Rnor_6.0 (GCF_000001895.5) 4 NC_005103.4 (170103062..170108281, complement)

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_005103.4 Chromosome 4 Reference Rnor_6.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Expression

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  • Project title: A rat RNA-Seq transcriptomic BodyMap across 11 organs and 4 developmental stages A rat RNA-Seq transcriptomic BodyMap across 11 organs and 4 developmental stages
  • Description: 320 RNA samples isolated from 11 organs (adrenal gland, brain, heart, kidney, liver, lung, muscle, spleen, thymus, and testes or uterus) from both sexes of Fischer 344 rats across four developmental stages (2-, 6-, 21-, and 104-weeks-old)
  • BioProject: PRJNA238328
  • Publication: PMID 24510058
  • Analysis date: Mon Jun 6 17:44:12 2016

Bibliography

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GeneRIFs: Gene References Into Functions

General protein information

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Names
single-pass membrane protein with coiled-coil domains 3
single-pass membrane and coiled-coil domain-containing protein 3

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Rattus norvegicus Annotation Release 106 (NOTE: not current)

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Rnor_6.0 Primary Assembly

Genomic

  1. NC_005103.4 Reference Rnor_6.0 Primary Assembly

    Range
    170103062..170108281 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_003749851.4 → XP_003749899.1  

Gene LinkOut

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