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Yipf4l1 Yip1 domain family, member 4 like 1 [ Rattus norvegicus (Norway rat) ]

Gene ID: 500622, updated on 2-Nov-2024

Summary

Official Symbol
Yipf4l1provided by RGD
Official Full Name
Yip1 domain family, member 4 like 1provided by RGD
Primary source
RGD:1565766
See related
EnsemblRapid:ENSRNOG00000065148 AllianceGenome:RGD:1565766
Gene type
protein coding
RefSeq status
MODEL
Organism
Rattus norvegicus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Rattus
Also known as
RGD1565766
Summary
Predicted to be involved in endoplasmic reticulum to Golgi vesicle-mediated transport. Predicted to be located in cytoplasm and membrane. [provided by Alliance of Genome Resources, Nov 2024]
Expression
Biased expression in Kidney (RPKM 250.7), Liver (RPKM 234.7) and 9 other tissues See more
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Genomic context

See Yipf4l1 in Genome Data Viewer
Location:
6q14
Exon count:
1
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCr8 (GCF_036323735.1) 6 NC_086024.1 (32643116..32644298)
RS_2023_06 previous assembly mRatBN7.2 (GCF_015227675.2) 6 NC_051341.1 (26923605..26924789)
106 previous assembly Rnor_6.0 (GCF_000001895.5) 6 NC_005105.4 (28367389..28368750)

Chromosome 6 - NC_086024.1Genomic Context describing neighboring genes Neighboring gene dystrobrevin, beta Neighboring gene basic transcription factor 3, pseudogene 5 Neighboring gene DNA methyltransferase 3 alpha Neighboring gene uncharacterized LOC120103494 Neighboring gene uncharacterized LOC120103495 Neighboring gene EFR3 homolog B Neighboring gene proopiomelanocortin

Genomic regions, transcripts, and products

Expression

  • Project title: A rat RNA-Seq transcriptomic BodyMap across 11 organs and 4 developmental stages A rat RNA-Seq transcriptomic BodyMap across 11 organs and 4 developmental stages
  • Description: 320 RNA samples isolated from 11 organs (adrenal gland, brain, heart, kidney, liver, lung, muscle, spleen, thymus, and testes or uterus) from both sexes of Fischer 344 rats across four developmental stages (2-, 6-, 21-, and 104-weeks-old)
  • BioProject: PRJNA238328
  • Publication: PMID 24510058
  • Analysis date: Mon Jun 6 17:44:12 2016

General protein information

Preferred Names
hypothetical gene supported by BC088468; NM_001009712; protein YIPF4-like
Names
NM_001009712
Yip1 domain family, member 4-like
hypothetical gene supported by BC088468

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_036323735.1-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCr8

Genomic

  1. NC_086024.1 Reference GRCr8

    Range
    32643116..32644298
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_039113095.2XP_038969023.1  protein YIPF4-like

    UniProtKB/TrEMBL
    A0A8L2Q3C8
    Related
    ENSRNOP00000111625.1, ENSRNOT00000113488.2
    Conserved Domains (1) summary
    cl21557
    Location:76239
    Yip1; Yip1 domain