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Tpt1l1 tumor protein, translationally-controlled 1 like 1 [ Rattus norvegicus (Norway rat) ]

Gene ID: 500923, updated on 2-Nov-2024

Summary

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Official Symbol
Tpt1l1provided by RGD
Official Full Name
tumor protein, translationally-controlled 1 like 1provided by RGD
Primary source
RGD:1565798
See related
EnsemblRapid:ENSRNOG00000002475 AllianceGenome:RGD:1565798
Gene type
protein coding
RefSeq status
MODEL
Organism
Rattus norvegicus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Rattus
Also known as
RGD1565798
Summary
Predicted to enable DNA-binding transcription factor binding activity. Predicted to be involved in negative regulation of ectoderm development and stem cell population maintenance. Predicted to be located in nucleoplasm. [provided by Alliance of Genome Resources, Nov 2024]
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Genomic context

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See Tpt1l1 in Genome Data Viewer
Location:
7q36
Exon count:
1
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCr8 (GCF_036323735.1) 7 NC_086025.1 (130456035..130461611, complement)
RS_2023_06 previous assembly mRatBN7.2 (GCF_015227675.2) 7 NC_051342.1 (128576963..128588712, complement)
106 previous assembly Rnor_6.0 (GCF_000001895.5) 7 NC_005106.4 (138894940..138895634, complement)

Chromosome 7 - NC_086025.1Genomic Context describing neighboring genes Neighboring gene PC-esterase domain containing 1B Neighboring gene uncharacterized LOC134479567 Neighboring gene basic transcription factor 3, pseudogene 7 Neighboring gene uncharacterized LOC134479782 Neighboring gene uncharacterized LOC120093728

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Gene Ontology Provided by RGD

Function Evidence Code Pubs
enables DNA-binding transcription factor binding IEA
Inferred from Electronic Annotation
more info
  
Process Evidence Code Pubs
involved_in negative regulation of ectoderm development IEA
Inferred from Electronic Annotation
more info
  
involved_in stem cell population maintenance IEA
Inferred from Electronic Annotation
more info
  
Component Evidence Code Pubs
located_in nucleoplasm IEA
Inferred from Electronic Annotation
more info
  

General protein information

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Preferred Names
translationally-controlled tumor protein-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_036323735.1-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCr8

Genomic

  1. NC_086025.1 Reference GRCr8

    Range
    130456035..130461611 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_063264357.1 → XP_063120427.1  translationally-controlled tumor protein-like

    UniProtKB/TrEMBL
    A0A8I6ALE5
    Related
    ENSRNOP00000094750.1, ENSRNOT00000003348.6
Nucleotide Protein Strain
Heading Accession and Version

Gene LinkOut

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