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DBV_gp1 ORF1 protein [ Dioscorea bacilliform virus ]

Gene ID: 5176414, updated on 6-Oct-2023

Summary

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Gene symbol
DBV_gp1
Gene description
ORF1 protein
Locus tag
DBV_gp1
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Dioscorea bacilliform virus (nat-host: Dioscorea sansibarensis)
Lineage
Viruses; Riboviria; Pararnavirae; Artverviricota; Revtraviricetes; Ortervirales; Caulimoviridae; Badnavirus
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Genomic context

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Location:
clone: B39-4
Sequence:
NC_009010.1 (441..872)

NC_009010.1Genomic Context describing neighboring genes Neighboring gene ORF2 protein Neighboring gene ORF3 protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_009010.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Molecular analysis of a full-length sequence of a new yam badnavirus from Dioscorea sansibarensis. Seal S, et al. Arch Virol, 2007. PMID 17195956

GeneRIFs: Gene References Into Functions

General gene information

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Homology

General protein information

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Preferred Names
ORF1 protein

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_009010.1 Reference assembly

    Range
    441..872
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. YP_001036291.1 ORF1 protein [Dioscorea bacilliform virus]

    See identical proteins and their annotated locations for YP_001036291.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    A2T398
    Conserved Domains (1) summary
    pfam07028
    Location:22 → 130
    DUF1319; Protein of unknown function (DUF1319)
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
ABI47981.1

Gene LinkOut

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Molecular Biology Databases