U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

retinin retinin [ Drosophila melanogaster (fruit fly) ]

Gene ID: 53564, updated on 2-Nov-2024

Summary

Go to the top of the page Help
Official Symbol
retininprovided by FlyBase
Official Full Name
retininprovided by FlyBase
Primary source
FLYBASE:FBgn0040074
Locus tag
Dmel_CG13057
See related
AllianceGenome:FB:FBgn0040074
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Drosophila melanogaster
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
Also known as
4A11; CG13057; Dmel\CG13057
Summary
A structural constituent of eye lens. Located in extracellular space. Is expressed in adult head; cone cell; cornea; organism; and primary pigment cell. [provided by Alliance of Genome Resources, Nov 2024]
Orthologs
all
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
See retinin in Genome Data Viewer
Location:
72E1-72E1; 3-44 cM
Exon count:
2
Annotation release Status Assembly Chr Location
Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) 3L NT_037436.4 (16331933..16332789)
Release 5.57 previous assembly Release 5 (GCF_000001215.2) 3L NT_037436.3 (16325033..16325889)

Chromosome 3L - NT_037436.4Genomic Context describing neighboring genes Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein Neighboring gene long non-coding RNA:CR45893

Genomic regions, transcripts, and products

Go to the top of the page Help

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

Related articles in PubMed

  1. Light Polarization by Biological Nanocoatings. Kryuchkov M, et al. ACS Appl Mater Interfaces, 2021 May 26. PMID 33974394
  2. Targeted gene mutations in Drosophila. Ballinger DG, et al. Proc Natl Acad Sci U S A, 1989 Dec. PMID 2556711, Free PMC Article
  3. Characterization of the Drosophila melanogaster retinin gene encoding a cornea-specific protein. Kim E, et al. Insect Mol Biol, 2008 Sep. PMID 18828839
  4. Bactericidal and Antiviral Bionic Metalized Nanocoatings. Kryuchkov M, et al. Nanomaterials (Basel), 2022 May 30. PMID 35683724, Free PMC Article
  5. The cuticular nature of corneal lenses in Drosophila melanogaster. Stahl AL, et al. Dev Genes Evol, 2017 Jul. PMID 28477155, Free PMC Article

See all (36) citations in PubMed

GeneRIFs: Gene References Into Functions

What's a GeneRIF?
  1. Western blot analysis and immunohistochemical studies of D. melanogaster eyes suggest that retinin is a cornea-specific protein.
    Title: Characterization of the Drosophila melanogaster retinin gene encoding a cornea-specific protein.
Submit: New GeneRIF Correction

Interactions

Go to the top of the page Help
Products Interactant Other Gene Complex Source Pubs Description

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by FlyBase

Function Evidence Code Pubs
enables structural constituent of eye lens IDA
Inferred from Direct Assay
more info
 PubMed 
Process Evidence Code Pubs
involved_in biological_process ND
No biological Data available
more info
  
Component Evidence Code Pubs
located_in extracellular space IDA
Inferred from Direct Assay
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
retinin
Names
CG13057-PA
retinin-PA

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NT_037436.4 Reference assembly

    Range
    16331933..16332789
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_080256.4 → NP_524995.2  retinin [Drosophila melanogaster]

    See identical proteins and their annotated locations for NP_524995.2

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    Q8SYA5, Q95TE5, Q9N2Q4, Q9VV36
    Related
    FBpp0075134
    Conserved Domains (1) summary
    pfam04527
    Location:122 → 169
    Retinin_C; Drosophila Retinin like protein
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q95TE7 Q95TE7
Q9VV36.2 Q9VV36

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

Molecular Biology Databases
Research Materials
Tools