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LBRM_14_1560 putative tyrosyl-tRNA synthetase [ Leishmania braziliensis MHOM/BR/75/M2904 ]

Gene ID: 5413953, updated on 30-Oct-2024

Summary

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Gene symbol
LBRM_14_1560
Gene description
putative tyrosyl-tRNA synthetase
Locus tag
LBRM_14_1560
Gene type
protein coding
RNA name
putative tyrosyl-tRNA synthetase
RefSeq status
PROVISIONAL
Organism
Leishmania braziliensis MHOM/BR/75/M2904 (strain: MHOM/BR/75/M2904)
Lineage
Eukaryota; Euglenozoa; Kinetoplastida; Trypanosomatidae; Leishmaniinae; Leishmania; Leishmania braziliensis species complex
Orthologs
Leishmania major all
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Genomic context

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Location:
chromosome: 14
Exon count:
1
Sequence:
Chromosome: 14; NC_009306.2 (603442..605499)

Chromosome 14 - NC_009306.2Genomic Context describing neighboring genes Neighboring gene putative inositol-3-phosphate synthase Neighboring gene pseudo Neighboring gene hypothetical protein, unknown function Neighboring gene conserved hypothetical protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_009306.2

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Comparative genomic analysis of three Leishmania species that cause diverse human disease. Peacock CS, et al. Nat Genet, 2007 Jul. PMID 17572675, Free PMC Article
  2. Chromosome and gene copy number variation allow major structural change between species and strains of Leishmania. Rogers MB, et al. Genome Res, 2011 Dec. PMID 22038252, Free PMC Article
  3. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ATP binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables aminoacyl-tRNA ligase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in tRNA aminoacylation for protein translation IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Names
putative tyrosyl-tRNA synthetase
XP_001563440.1

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_009306.2 Reference assembly

    Range
    603442..605499
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_001563390.1 → XP_001563440.1  putative tyrosyl-tRNA synthetase [Leishmania braziliensis MHOM/BR/75/M2904]

    See identical proteins and their annotated locations for XP_001563440.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    A0A3P3Z1W3, A4H7V7
    Conserved Domains (2) summary
    PTZ00348
    Location:1 → 682
    PTZ00348; tyrosyl-tRNA synthetase; Provisional
    cl00015
    Location:4 → 354
    nt_trans; nucleotidyl transferase superfamily
Nucleotide Protein
Heading Accession and Version

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