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HCAG_05435 hypothetical protein [ Histoplasma mississippiense (nom. inval.) ]

Gene ID: 5446564, updated on 31-Oct-2024

Summary

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Gene symbol
HCAG_05435
Gene description
hypothetical protein
Locus tag
HCAG_05435
See related
FungiDB:HCAG_05435; VEuPathDB:HCAG_05435
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Histoplasma mississippiense (nom. inval.) (strain: NAm1)
Lineage
Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina; Eurotiomycetes; Eurotiomycetidae; Onygenales; Ajellomycetaceae; Histoplasma; unclassified Histoplasma
Orthologs
Aspergillus fumigatus all
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Genomic context

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See HCAG_05435 in Genome Data Viewer
Location:
chromosome: Unknown
Exon count:
8

NW_001813978.1Genomic Context describing neighboring genes Neighboring gene hypothetical protein Neighboring gene hypothetical protein Neighboring gene hypothetical protein Neighboring gene hypothetical protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_001813978.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA-binding transcription factor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables transcription cis-regulatory region binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in positive regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
hypothetical protein

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NW_001813978.1 Reference assembly

    Range
    1933871..1938621
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_001539918.1 → XP_001539968.1  conserved hypothetical protein [Histoplasma mississippiense (nom. inval.)]

    See identical proteins and their annotated locations for XP_001539968.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    A6R727
    Conserved Domains (1) summary
    pfam11951
    Location:474 → 842
    Fungal_trans_2; Fungal specific transcription factor domain
Protein Accession Links
GenPept Link UniProtKB Link
EDN08936.1

Gene LinkOut

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Molecular Biology Databases
Research Materials