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HCAG_05039 hypothetical protein [ Histoplasma mississippiense (nom. inval.) ]

Gene ID: 5446567, updated on 31-Oct-2024

Summary

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Gene symbol
HCAG_05039
Gene description
hypothetical protein
Locus tag
HCAG_05039
See related
FungiDB:HCAG_05039; VEuPathDB:HCAG_05039
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Histoplasma mississippiense (nom. inval.) (strain: NAm1)
Lineage
Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina; Eurotiomycetes; Eurotiomycetidae; Onygenales; Ajellomycetaceae; Histoplasma; unclassified Histoplasma
Orthologs
Aspergillus fumigatus all
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Genomic context

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See HCAG_05039 in Genome Data Viewer
Location:
chromosome: Unknown
Exon count:
3

NW_001813978.1Genomic Context describing neighboring genes Neighboring gene hypothetical protein Neighboring gene glutamate decarboxylase Neighboring gene serine/threonine-protein kinase sid2 Neighboring gene hypothetical protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_001813978.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA-binding transcription factor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables transcription cis-regulatory region binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in positive regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
hypothetical protein

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NW_001813978.1 Reference assembly

    Range
    620590..623219
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_001539522.1 → XP_001539572.1  predicted protein [Histoplasma mississippiense (nom. inval.)]

    See identical proteins and their annotated locations for XP_001539572.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    A6R5Y1
    Conserved Domains (1) summary
    pfam11951
    Location:254 → 603
    Fungal_trans_2; Fungal specific transcription factor domain
Protein Accession Links
GenPept Link UniProtKB Link
EDN08540.1

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

Molecular Biology Databases
Research Materials