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HCAG_05259 transporter ATM1, mitochondrial precursor [ Histoplasma mississippiense (nom. inval.) ]

Gene ID: 5446571, updated on 31-Oct-2024

Summary

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Gene symbol
HCAG_05259
Gene description
transporter ATM1, mitochondrial precursor
Locus tag
HCAG_05259
See related
FungiDB:HCAG_05259; VEuPathDB:HCAG_05259
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Histoplasma mississippiense (nom. inval.) (strain: NAm1)
Lineage
Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina; Eurotiomycetes; Eurotiomycetidae; Onygenales; Ajellomycetaceae; Histoplasma; unclassified Histoplasma
Orthologs
Aspergillus fumigatus all
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Genomic context

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See HCAG_05259 in Genome Data Viewer
Location:
chromosome: Unknown
Exon count:
10

NW_001813978.1Genomic Context describing neighboring genes Neighboring gene hypothetical protein Neighboring gene hypothetical protein Neighboring gene hypothetical protein Neighboring gene hypothetical protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_001813978.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ABC-type transporter activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables ATP binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables ATP hydrolysis activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in intracellular iron ion homeostasis IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in transmembrane transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in mitochondrial inner membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
transporter ATM1, mitochondrial precursor

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NW_001813978.1 Reference assembly

    Range
    1367360..1370561
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_001539742.1 → XP_001539792.1  transporter ATM1, mitochondrial precursor [Histoplasma mississippiense (nom. inval.)]

    See identical proteins and their annotated locations for XP_001539792.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    A6R6K1
    Conserved Domains (3) summary
    cd03253
    Location:430 → 668
    ABCC_ATM1_transporter; ATP-binding cassette domain of iron-sulfur clusters transporter, subfamily C
    COG5265
    Location:168 → 665
    ATM1; ABC-type transport system involved in Fe-S cluster assembly, permease and ATPase components [Posttranslational modification, protein turnover, chaperones]
    pfam00664
    Location:117 → 383
    ABC_membrane; ABC transporter transmembrane region
Protein Accession Links
GenPept Link UniProtKB Link
EDN08760.1

Gene LinkOut

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Molecular Biology Databases
Research Materials