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LOC5516222 9-divinyl ether synthase [ Nematostella vectensis (starlet sea anemone) ]

Gene ID: 5516222, updated on 6-Jun-2024

Summary

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Gene symbol
LOC5516222
Gene description
9-divinyl ether synthase
Locus tag
NEMVEDRAFT_v1g241155
Gene type
protein coding
RefSeq status
MODEL
Organism
Nematostella vectensis
Lineage
Eukaryota; Metazoa; Cnidaria; Anthozoa; Hexacorallia; Actiniaria; Edwardsiidae; Nematostella
Also known as
EAS
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Genomic context

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See LOC5516222 in Genome Data Viewer
Location:
chromosome: 8
Exon count:
13
Annotation release Status Assembly Chr Location
101 current jaNemVect1.1 (GCF_932526225.1) 8 NC_064041.1 (12982560..12995379)
100 previous assembly ASM20922v1 (GCF_000209225.1) Unplaced Scaffold NW_001834374.1 (959644..970941, complement)

Chromosome 8 - NC_064041.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC5516273 Neighboring gene small RNA 2'-O-methyltransferase Neighboring gene palmitoyltransferase ZDHHC12-A Neighboring gene allene oxide synthase Neighboring gene glycosaminoglycan xylosylkinase

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Identification of CYP443D1 (CYP74 clan) of Nematostella vectensis as a first cnidarian epoxyalcohol synthase and insights into its catalytic mechanism. Toporkova YY, et al. Biochim Biophys Acta Mol Cell Biol Lipids, 2017 Oct. PMID 28774820

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables heme binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables iron ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables monooxygenase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in sterol metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
9-divinyl ether synthase
Names
epoxyalcohol synthase CYP443D1
predicted protein

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Nematostella vectensis Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference jaNemVect1.1

Genomic

  1. NC_064041.1 Reference jaNemVect1.1

    Range
    12982560..12995379
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_001636310.3 → XP_001636360.2  9-divinyl ether synthase

    UniProtKB/TrEMBL
    A7RWD6
Nucleotide Protein
Heading Accession and Version

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