zgc:154075 zgc:154075 [Danio rerio (zebrafish)] - Gene

Summary

Official Symbol: zgc:154075provided by ZNC
Official Full Name: zgc:154075provided by ZNC
Primary source: ZFIN:ZDB-GENE-060929-910
See related: Ensembl:ENSDARG00000067630 AllianceGenome:ZFIN:ZDB-GENE-060929-910
Gene type: protein coding
RefSeq status: PREDICTED
Organism: Danio rerio
Lineage: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio
Summary: Predicted to enable oxidoreductase activity. [provided by Alliance of Genome Resources, Apr 2022]
Orthologs: all
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Genomic context

Location:: chromosome: 23

Exon count:: 14

Annotation release	Status	Assembly	Chr	Location
RS_2024_08	current	GRCz11 (GCF_000002035.6)	23	NC_007134.7 (20803270..20814485)
105	previous assembly	GRCz10 (GCF_000002035.5)	23	NC_007134.6 (20876879..20888659)

Chromosome 23 - NC_007134.7 Genomic Context describing neighboring genes

Genomic regions, transcripts, and products

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Genomic Sequence:

Go to nucleotide: Graphics FASTA GenBank

Expression

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See details

Project title: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
Description: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
BioProject: PRJEB1986
Analysis date: Fri Dec 8 19:48:10 2017

Bibliography

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GeneRIFs: Gene References Into Functions

What's a GeneRIF?

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General gene information

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Gene Ontology Provided by ZFIN

Function	Evidence Code	Pubs
enables nucleotide binding	IEA Inferred from Electronic Annotation more info

Component	Evidence Code	Pubs
is_active_in cellular_component	ND No biological Data available more info

General protein information

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Preferred Names: uncharacterized protein LOC556929

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

NM_001079964.1 → NP_001073433.1 uncharacterized protein LOC556929

See identical proteins and their annotated locations for NP_001073433.1

Status: PREDICTED

Source sequence(s)

BC124535

UniProtKB/TrEMBL

Q08BV8

Related

ENSDARP00000088151.3, ENSDART00000097381.4

Conserved Domains (3) summary

COG0673
Location:9 → 208

MviM; Predicted dehydrogenase [General function prediction only]

pfam01408
Location:7 → 128

GFO_IDH_MocA; Oxidoreductase family, NAD-binding Rossmann fold

cl21649
Location:140 → 214

GFO_IDH_MocA_C; Oxidoreductase family, C-terminal alpha/beta domain