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COX1 cytochrome c oxidase subunit I [ Pocillopora damicornis ]

Gene ID: 5580393, updated on 18-Aug-2023

Summary

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Gene symbol
COX1
Gene description
cytochrome c oxidase subunit I
Locus tag
KEG64_p01
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Pocillopora damicornis (common: cauliflower lace, specimen-voucher: J.F. Flot 04NC293 (MNHN))
Lineage
Eukaryota; Metazoa; Cnidaria; Anthozoa; Hexacorallia; Scleractinia; Astrocoeniina; Pocilloporidae; Pocillopora
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Genomic context

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See COX1 in Genome Data Viewer
Annotation release Status Assembly Chr Location
100 current ASM370409v1 (GCF_003704095.1) MT (non-nuclear) NC_009797.1 (15829..17388)

Chromosome MT - NC_009797.1Genomic Context describing neighboring genes Neighboring gene tRNA-Trp Neighboring gene ATP synthase F0 subunit 8

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_009797.1 Chromosome MT Reference ASM370409v1 non-nuclear

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. The mitochondrial genome of Pocillopora (Cnidaria: Scleractinia) contains two variable regions: the putative D-loop and a novel ORF of unknown function. Flot JF, et al. Gene, 2007 Oct 15. PMID 17716831

GeneRIFs: Gene References Into Functions

General gene information

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Homology

General protein information

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Preferred Names
cytochrome c oxidase subunit I

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_009797.1 Reference assembly

    Range
    15829..17388
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. YP_001456716.1 cytochrome c oxidase subunit I (mitochondrion) [Pocillopora damicornis]

    See identical proteins and their annotated locations for YP_001456716.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    A7XPE4, B5L5L2
    Conserved Domains (2) summary
    MTH00182
    Location:2 → 519
    COX1; cytochrome c oxidase subunit I; Provisional
    pfam00115
    Location:17 → 450
    COX1; Cytochrome C and Quinol oxidase polypeptide I
Nucleotide Protein
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