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COX2 cytochrome c oxidase subunit II [ Pocillopora damicornis ]

Gene ID: 5580397, updated on 18-Aug-2023

Summary

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Gene symbol
COX2
Gene description
cytochrome c oxidase subunit II
Locus tag
KEG64_p05
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Pocillopora damicornis (common: cauliflower lace, specimen-voucher: J.F. Flot 04NC293 (MNHN))
Lineage
Eukaryota; Metazoa; Cnidaria; Anthozoa; Hexacorallia; Scleractinia; Astrocoeniina; Pocilloporidae; Pocillopora
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Genomic context

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See COX2 in Genome Data Viewer
Annotation release Status Assembly Chr Location
100 current ASM370409v1 (GCF_003704095.1) MT (non-nuclear) NC_009797.1 (12082..12882)

Chromosome MT - NC_009797.1Genomic Context describing neighboring genes Neighboring gene NADH dehydrogenase subunit 5 Neighboring gene NADH dehydrogenase subunit 4 Neighboring gene cytochrome c oxidase subunit III Neighboring gene NADH dehydrogenase subunit 4L Neighboring gene NADH dehydrogenase subunit 3 Neighboring gene tRNA-Trp

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_009797.1 Chromosome MT Reference ASM370409v1 non-nuclear

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. The mitochondrial genome of Pocillopora (Cnidaria: Scleractinia) contains two variable regions: the putative D-loop and a novel ORF of unknown function. Flot JF, et al. Gene, 2007 Oct 15. PMID 17716831

GeneRIFs: Gene References Into Functions

General gene information

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Homology

General protein information

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Preferred Names
cytochrome c oxidase subunit II

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_009797.1 Reference assembly

    Range
    12082..12882
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. YP_001456712.1 cytochrome c oxidase subunit II (mitochondrion) [Pocillopora damicornis]

    See identical proteins and their annotated locations for YP_001456712.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    A7XPD9, B5L5K8
    Conserved Domains (3) summary
    MTH00023
    Location:24 → 266
    COX2; cytochrome c oxidase subunit II; Validated
    cd13912
    Location:125 → 255
    CcO_II_C; C-terminal domain of Cytochrome c Oxidase subunit II
    pfam02790
    Location:34 → 115
    COX2_TM; Cytochrome C oxidase subunit II, transmembrane domain
Nucleotide Protein
Heading Accession and Version

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