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Pgam2 phosphoglycerate mutase 2 [ Mus musculus (house mouse) ]

Gene ID: 56012, updated on 2-Nov-2024

Summary

Official Symbol
Pgam2provided by MGI
Official Full Name
phosphoglycerate mutase 2provided by MGI
Primary source
MGI:MGI:1933118
See related
Ensembl:ENSMUSG00000020475 AllianceGenome:MGI:1933118
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Summary
Enables phosphoglycerate mutase activity. Involved in canonical glycolysis. Acts upstream of or within Notch signaling pathway and glycolytic process. Is active in cytosol. Is expressed in several structures, including alimentary system; brain; genitourinary system; limb mesenchyme; and sensory organ. Human ortholog(s) of this gene implicated in myoglobinuria. Orthologous to human PGAM2 (phosphoglycerate mutase 2). [provided by Alliance of Genome Resources, Nov 2024]
Expression
Biased expression in testis adult (RPKM 618.6), heart adult (RPKM 314.4) and 2 other tissues See more
Orthologs
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Genomic context

See Pgam2 in Genome Data Viewer
Location:
11 A1; 11 3.87 cM
Exon count:
3
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCm39 (GCF_000001635.27) 11 NC_000077.7 (5751637..5753796, complement)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 11 NC_000077.6 (5801637..5803796, complement)

Chromosome 11 - NC_000077.7Genomic Context describing neighboring genes Neighboring gene upregulator of cell proliferation Neighboring gene STARR-seq mESC enhancer starr_28441 Neighboring gene STARR-positive B cell enhancer ABC_E8385 Neighboring gene ubiquitin-conjugating enzyme E2D, pseudogene Neighboring gene STARR-positive B cell enhancer ABC_E6945 Neighboring gene STARR-seq mESC enhancer starr_28442 Neighboring gene drebrin-like Neighboring gene STARR-positive B cell enhancer ABC_E9815 Neighboring gene STARR-seq mESC enhancer starr_28443 Neighboring gene polymerase (DNA directed), mu Neighboring gene AE binding protein 1 Neighboring gene polymerase (DNA directed), delta 2, regulatory subunit

Genomic regions, transcripts, and products

Expression

  • Project title: Mouse ENCODE transcriptome data Mouse ENCODE transcriptome data
  • Description: RNA profiling data sets generated by the Mouse ENCODE project.
  • BioProject: PRJNA66167
  • Publication: PMID 25409824
  • Analysis date: n/a

Bibliography

GeneRIFs: Gene References Into Functions

What's a GeneRIF?

Variation

Alleles

Alleles of this type are documented at Mouse Genome Informatics  (MGI)
  • Endonuclease-mediated (3) 

Pathways from PubChem

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General gene information

Markers

Gene Ontology Provided by MGI

Function Evidence Code Pubs
enables 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase activity IEA
Inferred from Electronic Annotation
more info
 
enables 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase activity ISO
Inferred from Sequence Orthology
more info
 
enables bisphosphoglycerate mutase activity IEA
Inferred from Electronic Annotation
more info
 
enables hydrolase activity IEA
Inferred from Electronic Annotation
more info
 
enables identical protein binding IEA
Inferred from Electronic Annotation
more info
 
enables identical protein binding ISO
Inferred from Sequence Orthology
more info
 
enables phosphoglycerate mutase activity IDA
Inferred from Direct Assay
more info
PubMed 
enables phosphoglycerate mutase activity ISO
Inferred from Sequence Orthology
more info
 
enables protein binding IPI
Inferred from Physical Interaction
more info
PubMed 
Process Evidence Code Pubs
acts_upstream_of_or_within Notch signaling pathway IDA
Inferred from Direct Assay
more info
PubMed 
involved_in canonical glycolysis IDA
Inferred from Direct Assay
more info
PubMed 
involved_in gluconeogenesis IEA
Inferred from Electronic Annotation
more info
 
involved_in gluconeogenesis ISO
Inferred from Sequence Orthology
more info
 
acts_upstream_of_or_within glycolytic process IDA
Inferred from Direct Assay
more info
PubMed 
involved_in glycolytic process ISO
Inferred from Sequence Orthology
more info
 
involved_in response to mercury ion IEA
Inferred from Electronic Annotation
more info
 
involved_in response to mercury ion ISO
Inferred from Sequence Orthology
more info
 
involved_in spermatogenesis IEA
Inferred from Electronic Annotation
more info
 
involved_in striated muscle contraction IEA
Inferred from Electronic Annotation
more info
 
involved_in striated muscle contraction ISO
Inferred from Sequence Orthology
more info
 
Component Evidence Code Pubs
is_active_in cytosol IDA
Inferred from Direct Assay
more info
PubMed 

General protein information

Preferred Names
phosphoglycerate mutase 2
Names
BPG-dependent PGAM 2
PGAM-M
muscle-specific phosphoglycerate mutase
phosphoglycerate mutase isozyme M
phosphoglycerate mutase muscle-specific subunit
NP_061358.1

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_018870.3NP_061358.1  phosphoglycerate mutase 2

    See identical proteins and their annotated locations for NP_061358.1

    Status: VALIDATED

    Source sequence(s)
    AK169019, AV041299, BE650074
    Consensus CDS
    CCDS24404.1
    UniProtKB/Swiss-Prot
    O70250
    UniProtKB/TrEMBL
    Q5NCI4
    Related
    ENSMUSP00000020768.4, ENSMUST00000020768.4
    Conserved Domains (1) summary
    TIGR01258
    Location:4251
    pgm_1; phosphoglycerate mutase, BPG-dependent, family 1

RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000077.7 Reference GRCm39 C57BL/6J

    Range
    5751637..5753796 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)