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Il17b interleukin 17B [ Mus musculus (house mouse) ]

Gene ID: 56069, updated on 2-Nov-2024

Summary

Official Symbol
Il17bprovided by MGI
Official Full Name
interleukin 17Bprovided by MGI
Primary source
MGI:MGI:1928397
See related
Ensembl:ENSMUSG00000024578 AllianceGenome:MGI:1928397
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Also known as
Zcyto7; 1110006O16Rik; 1700006N07Rik
Summary
Enables cytokine activity. Acts upstream of or within positive regulation of cytokine production involved in inflammatory response. Predicted to be located in extracellular space. Is expressed in several structures, including central nervous system; dorsal root ganglion; limb; limb bud; and trunk. Orthologous to human IL17B (interleukin 17B). [provided by Alliance of Genome Resources, Nov 2024]
Expression
Biased expression in limb E14.5 (RPKM 8.8), mammary gland adult (RPKM 3.7) and 1 other tissue See more
Orthologs
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Genomic context

See Il17b in Genome Data Viewer
Location:
18 E1; 18 34.67 cM
Exon count:
5
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCm39 (GCF_000001635.27) 18 NC_000084.7 (61821006..61825609)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 18 NC_000084.6 (61687935..61692538)

Chromosome 18 - NC_000084.7Genomic Context describing neighboring genes Neighboring gene microRNA 145a Neighboring gene cardiac mesoderm enhancer-associated non-coding RNA Neighboring gene microRNA 143 Neighboring gene predicted gene, 38165 Neighboring gene STARR-positive B cell enhancer mm9_chr18:61857809-61858110 Neighboring gene prenylcysteine oxidase 1 like Neighboring gene STARR-seq mESC enhancer starr_44762 Neighboring gene GrpE-like 2, mitochondrial Neighboring gene predicted gene, 17883

Genomic regions, transcripts, and products

Expression

  • Project title: Mouse ENCODE transcriptome data Mouse ENCODE transcriptome data
  • Description: RNA profiling data sets generated by the Mouse ENCODE project.
  • BioProject: PRJNA66167
  • Publication: PMID 25409824
  • Analysis date: n/a

Bibliography

GeneRIFs: Gene References Into Functions

What's a GeneRIF?

Variation

Alleles

Alleles of this type are documented at Mouse Genome Informatics  (MGI)

General protein information

Preferred Names
interleukin-17B
Names
IL-17B
cytokine CX1
cytokine-like protein ZCYTO7
gene for cytokine-like protein
neuronal interleukin-17-related factor

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_019508.1NP_062381.1  interleukin-17B precursor

    See identical proteins and their annotated locations for NP_062381.1

    Status: PROVISIONAL

    Source sequence(s)
    AF184970
    Consensus CDS
    CCDS29286.1
    UniProtKB/Swiss-Prot
    Q99MY3, Q9CTI4, Q9QXT6
    Related
    ENSMUSP00000025471.3, ENSMUST00000025471.4
    Conserved Domains (1) summary
    pfam06083
    Location:96179
    IL17; Interleukin-17

RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000084.7 Reference GRCm39 C57BL/6J

    Range
    61821006..61825609
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_030250543.2XP_030106403.1  interleukin-17B isoform X2

    Conserved Domains (1) summary
    pfam06083
    Location:41120
    IL17; Interleukin-17
  2. XM_006526106.4XP_006526169.1  interleukin-17B isoform X1

    Conserved Domains (1) summary
    pfam06083
    Location:101180
    IL17; Interleukin-17
  3. XM_006526108.5XP_006526171.1  interleukin-17B isoform X2

    See identical proteins and their annotated locations for XP_006526171.1

    Conserved Domains (1) summary
    pfam06083
    Location:41120
    IL17; Interleukin-17