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DW871_RS14535 recombinase family protein [ Sellimonas intestinalis ]

Gene ID: 56803921, updated on 6-Jun-2024

Summary

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Gene symbol
DW871_RS14535
Gene description
recombinase family protein
Locus tag
DW871_RS14535
Gene type
protein coding
Organism
Sellimonas intestinalis (strain: AM38-2BH, nat-host: Homo sapiens)
Lineage
Bacteria; Bacillota; Clostridia; Lachnospirales; Lachnospiraceae; Sellimonas
Old locus tag
DW871_14530
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Genomic context

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NZ_QVMD01000012.1Genomic Context describing neighboring genes Neighboring gene transposase Neighboring gene transposon-encoded TnpW family protein Neighboring gene ATP-binding protein Neighboring gene phage replisome organizer N-terminal domain-containing protein Neighboring gene hypothetical protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NZ_QVMD01000012.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Structural basis for catalytic activation of a serine recombinase. Keenholtz RA, et al. Structure, 2011 Jun 8. PMID 21645851, Free PMC Article
  2. The Serine Recombinases. Stark WM. Microbiol Spectr, 2014 Dec. PMID 26104451

GeneRIFs: Gene References Into Functions

General protein information

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Preferred Names
recombinase family protein

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NZ_QVMD01000012.1 Reference assembly

    Range
    922..2532 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. WP_002569232.1 MULTISPECIES: recombinase family protein [Bacteria]

    See identical proteins and their annotated locations for WP_002569232.1

    UniProtKB/TrEMBL
    A0A0J9C0W1, A0A133ZBU9, A0A173STJ0, A0A173VK27, A0A173YXM8, A0A174BH28, A0A1C6DZU0, A0A1C6ED02, A0A1C6GCG9, A0A1I6JPC3, A0A1M4XCR9, A0A1Y4NNM3, A0A2R3MZS0, A0A328UDY1, A0A373B3P7, A0A373ULC0, A0A3A6DCA4, A0A3A6E2N3, A0A3E3DCF8, A0A3E4VB35, A0A3E4WUX0, A0A3R6KQM2, A0A3R6L701, A0A3R6TVQ2, A0A415WIZ4, A0A416JN47, A0A416K815, A0A417ALB4, A0A417C345, A0A417HHN0, A0A417IX30, A0A417U1V5, A0A417W2W0, A0A4P9C4N8, A0A810PMQ7, A0A810QM21, A0A829VXX9, A0A833CAX7, A0A8B3ALU0, A0A8B3CDP2, A0A8G1WV77, A0A926I0A7, A0A9X8CSP8, A0AA36Y3K8, A0AA37A9T2, A0AA92B2W7, B0N9J3, B0P8S7, F7KIT6, G9X0K8, J4TJF8, K0XHM6, K9D397
    Conserved Domains (4) summary
    cd03770
    Location:11 → 150
    SR_TndX_transposase; Serine Recombinase (SR) family, TndX-like transposase subfamily, catalytic domain; composed of large serine recombinases similar to Clostridium TndX and TnpX transposases. Serine recombinases catalyze site-specific recombination of DNA molecules by a ...
    pfam07508
    Location:181 → 304
    Recombinase
    pfam13408
    Location:315 → 375
    Zn_ribbon_recom; Recombinase zinc beta ribbon domain
    pfam14287
    Location:469 → 533
    DUF4368; Domain of unknown function (DUF4368)
Nucleotide Protein
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