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DY225_RS22175 porin family protein [ Chryseobacterium indologenes ]

Gene ID: 56901405, updated on 24-Oct-2024

Summary

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Gene symbol
DY225_RS22175
Gene description
porin family protein
Locus tag
DY225_RS22175
Gene type
protein coding
Organism
Chryseobacterium indologenes (strain: NCTC10796, serovar: not available: to be reported later, type-material: type strain of Flavobacterium indologenes)
Lineage
Bacteria; Bacteroidota; Flavobacteriia; Flavobacteriales; Weeksellaceae; Chryseobacterium group; Chryseobacterium
Old locus tag
NCTC10796_04544
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Genomic context

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NZ_UIGS01000002.1Genomic Context describing neighboring genes Neighboring gene hypothetical protein Neighboring gene bifunctional demethylmenaquinone methyltransferase/2-methoxy-6-polyprenyl-1,4-benzoquinol methylase UbiE Neighboring gene hypothetical protein Neighboring gene cell division protein ZapA

Genomic regions, transcripts, and products

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Genomic Sequence:
NZ_UIGS01000002.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Porins and small-molecule translocation across the outer membrane of Gram-negative bacteria. Vergalli J, et al. Nat Rev Microbiol, 2020 Mar. PMID 31792365
  2. Outer Membrane Porins. Masi M, et al. Subcell Biochem, 2019. PMID 31214985

GeneRIFs: Gene References Into Functions

General gene information

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Homology

General protein information

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Preferred Names
porin family protein

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NZ_UIGS01000002.1 Reference assembly

    Range
    4894465..4895247
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. WP_027372843.1 MULTISPECIES: porin family protein [Chryseobacterium]

    See identical proteins and their annotated locations for WP_027372843.1

    UniProtKB/TrEMBL
    A0A1Z3VY40
    Conserved Domains (1) summary
    pfam13568
    Location:41 → 229
    OMP_b-brl_2; Outer membrane protein beta-barrel domain
Nucleotide Protein
Heading Accession and Version

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