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DQN42_RS08415 antigen I/II family LPXTG-anchored adhesin [ Streptococcus intermedius ]

Gene ID: 57845466, updated on 6-Jun-2024

Summary

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Gene symbol
DQN42_RS08415
Gene description
antigen I/II family LPXTG-anchored adhesin
Locus tag
DQN42_RS08415
Gene type
protein coding
Organism
Streptococcus intermedius (strain: NCTC11324, serovar: not available: to be reported later, culture-collection: NCTC:11324, type-material: type strain of Streptococcus intermedius)
Lineage
Bacteria; Bacillota; Bacilli; Lactobacillales; Streptococcaceae; Streptococcus; Streptococcus anginosus group
Old locus tag
NCTC11324_01694
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Genomic context

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Location:
chromosome: 1

1 - NZ_LS483436.1Genomic Context describing neighboring genes Neighboring gene aromatic acid exporter family protein Neighboring gene CHAP domain-containing protein Neighboring gene phosphoglycerate kinase Neighboring gene DNA-directed RNA polymerase subunit beta'

Genomic regions, transcripts, and products

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Genomic Sequence:
NZ_LS483436.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Elongated fibrillar structure of a streptococcal adhesin assembled by the high-affinity association of alpha- and PPII-helices. Larson MR, et al. Proc Natl Acad Sci U S A, 2010 Mar 30. PMID 20231452, Free PMC Article
  2. Crystal structure of the variable domain of the Streptococcus gordonii surface protein SspB. Forsgren N, et al. Protein Sci, 2009 Sep. PMID 19609934, Free PMC Article
  3. Two intramolecular isopeptide bonds are identified in the crystal structure of the Streptococcus gordonii SspB C-terminal domain. Forsgren N, et al. J Mol Biol, 2010 Apr 2. PMID 20138058, Free PMC Article

GeneRIFs: Gene References Into Functions

General protein information

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Preferred Names
antigen I/II family LPXTG-anchored adhesin

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NZ_LS483436.1 Reference assembly

    Range
    1706981..1710913 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. WP_003075937.1 antigen I/II family LPXTG-anchored adhesin [Streptococcus intermedius]

    See identical proteins and their annotated locations for WP_003075937.1

    UniProtKB/Swiss-Prot
    Q9KW51
    Conserved Domains (6) summary
    TIGR03726
    Location:8 → 40
    strep_RK_lipo; putative cross-wall-targeting lipoprotein signal
    TIGR04228
    Location:914 → 1087
    isopep_sspB_C2; adhesin isopeptide-forming domain, sspB-C2 type
    pfam00746
    Location:1271 → 1306
    Gram_pos_anchor; Gram positive anchor
    pfam08363
    Location:327 → 653
    GbpC; Glucan-binding protein C
    cl16982
    Location:1044 → 1235
    Antigen_C; Cell surface antigen C-terminus
    cl26511
    Location:90 → 360
    Neuromodulin_N; Gap junction protein N-terminal region
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q9KW51.2

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