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rpsM 30S ribosomal protein S13 [ Streptococcus intermedius ]

Gene ID: 57845511, updated on 10-Oct-2024

Summary

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Gene symbol
rpsM
Gene description
30S ribosomal protein S13
Locus tag
DQN42_RS08650
Gene type
protein coding
Organism
Streptococcus intermedius (strain: NCTC11324, serovar: not available: to be reported later, culture-collection: NCTC:11324, type-material: type strain of Streptococcus intermedius)
Lineage
Bacteria; Bacillota; Bacilli; Lactobacillales; Streptococcaceae; Streptococcus; Streptococcus anginosus group
Old locus tag
NCTC11324_01741
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Genomic context

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Location:
chromosome: 1

1 - NZ_LS483436.1Genomic Context describing neighboring genes Neighboring gene DNA-directed RNA polymerase subunit alpha Neighboring gene 30S ribosomal protein S11 Neighboring gene 50S ribosomal protein L36 Neighboring gene translation initiation factor IF-1

Genomic regions, transcripts, and products

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Genomic Sequence:
NZ_LS483436.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Characterization of the Pathogenicity of Streptococcus intermedius TYG1620 Isolated from a Human Brain Abscess Based on the Complete Genome Sequence with Transcriptome Analysis and Transposon Mutagenesis in a Murine Subcutaneous Abscess Model. Hasegawa N, et al. Infect Immun, 2017 Feb. PMID 27895128, Free PMC Article
  2. Multiple effects of S13 in modulating the strength of intersubunit interactions in the ribosome during translation. Cukras AR, et al. J Mol Biol, 2005 May 27. PMID 15876367, Free PMC Article
  3. Ribosomal proteins S12 and S13 function as control elements for translocation of the mRNA:tRNA complex. Cukras AR, et al. Mol Cell, 2003 Aug. PMID 14536072
  4. Assembly of the 30S ribosomal subunit: positioning ribosomal protein S13 in the S7 assembly branch. Grondek JF, et al. RNA, 2004 Dec. PMID 15525707, Free PMC Article

GeneRIFs: Gene References Into Functions

General protein information

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Preferred Names
30S ribosomal protein S13

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NZ_LS483436.1 Reference assembly

    Range
    1752022..1752387 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. WP_002262317.1 MULTISPECIES: 30S ribosomal protein S13 [Streptococcus]

    See identical proteins and their annotated locations for WP_002262317.1

    UniProtKB/Swiss-Prot
    Q8DS35
    UniProtKB/TrEMBL
    A0A0C1K3Y6, A0A0P0NA81, A0A1F0NBH3, A0A1F0RFA4, A0A1Q8RCX8, A0A1S1FD84, A0A354QRC4, A0A380KWS5, A0A380L7A6, A0A380M8N0, A0A3Q9EZE8, A0A7G9AXX2, A0A7L8W820, A0A7X9QHL3, A0A829BJY1, A0AAD2SUK1, A0AAD2T8D4, A0AAE8G178, A0AAI9J8R3, A0AAN4P7T5, A0AAP8P8C0, E6J2R8, F9PA22, I0SID5, T1ZHU1, W1TQ07
    Conserved Domains (1) summary
    PRK05179
    Location:1 → 121
    rpsM; 30S ribosomal protein S13; Validated
Nucleotide Protein
Heading Accession and Version