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dapF diaminopimelate epimerase [ Pseudomonas rhodesiae ]

Gene ID: 58698995, updated on 27-Apr-2024

Summary

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Gene symbol
dapF
Gene description
diaminopimelate epimerase
Locus tag
HRH33_RS26240
Gene type
protein coding
Organism
Pseudomonas rhodesiae (strain: NL2019)
Lineage
Bacteria; Pseudomonadota; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas
Old locus tag
HRH33_26240
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Genomic context

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NZ_CP054205.1Genomic Context describing neighboring genes Neighboring gene lipoprotein Neighboring gene diaminopimelate decarboxylase Neighboring gene DUF484 family protein Neighboring gene tyrosine recombinase XerC Neighboring gene HAD-IA family hydrolase

Genomic regions, transcripts, and products

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Genomic Sequence:
NZ_CP054205.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Characterization of Mycobacterium tuberculosis diaminopimelic acid epimerase: paired cysteine residues are crucial for racemization. Usha V, et al. FEMS Microbiol Lett, 2008 Mar. PMID 18269631
  2. Dimerization of bacterial diaminopimelate epimerase is essential for catalysis. Hor L, et al. J Biol Chem, 2013 Mar 29. PMID 23426375, Free PMC Article
  3. Chemical mechanism of Haemophilus influenzae diaminopimelate epimerase. Koo CW, et al. Biochemistry, 1999 Apr 6. PMID 10194362

GeneRIFs: Gene References Into Functions

General protein information

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Preferred Names
diaminopimelate epimerase
WP_034101446.1

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NZ_CP054205.1 Reference assembly

    Range
    5764056..5764886
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    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. WP_034101446.1 MULTISPECIES: diaminopimelate epimerase [Pseudomonas]

    UniProtKB/TrEMBL
    A0A2G0WMJ0
    Conserved Domains (1) summary
    PRK00450
    Location:1 → 276
    dapF; diaminopimelate epimerase; Provisional
Nucleotide Protein
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