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Tssk3 testis-specific serine kinase 3 [ Mus musculus (house mouse) ]

Gene ID: 58864, updated on 2-Nov-2024

Summary

Official Symbol
Tssk3provided by MGI
Official Full Name
testis-specific serine kinase 3provided by MGI
Primary source
MGI:MGI:1929914
See related
Ensembl:ENSMUSG00000000411 AllianceGenome:MGI:1929914
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Also known as
Tsk-3; Stk22c; Stk22d; Tssk-3; Tssk3b; 1700014N07Rik; 4930594I21Rik
Summary
Enables magnesium ion binding activity; manganese ion binding activity; and protein serine/threonine kinase activity. Involved in spermatid development. Is active in sperm flagellum. Is expressed in germ cell of testis; spermatid; spermatocyte; and testis. Orthologous to human TSSK3 (testis specific serine kinase 3). [provided by Alliance of Genome Resources, Nov 2024]
Expression
Restricted expression toward testis adult (RPKM 112.4) See more
Orthologs
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Genomic context

See Tssk3 in Genome Data Viewer
Location:
4 D2.2; 4 63.26 cM
Exon count:
4
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCm39 (GCF_000001635.27) 4 NC_000070.7 (129382801..129385523, complement)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 4 NC_000070.6 (129489008..129491730, complement)

Chromosome 4 - NC_000070.7Genomic Context describing neighboring genes Neighboring gene CapStarr-seq enhancer MGSCv37_chr4:129138525-129138708 Neighboring gene predicted gene, 24621 Neighboring gene BSD domain containing 1 Neighboring gene family with sequence similarity 229, member A Neighboring gene STARR-positive B cell enhancer ABC_E6223 Neighboring gene STARR-seq mESC enhancer starr_11499 Neighboring gene MARCKS-like 1 Neighboring gene histone deacetylase 1 Neighboring gene STARR-positive B cell enhancer ABC_E1039

Genomic regions, transcripts, and products

Expression

  • Project title: Mouse ENCODE transcriptome data Mouse ENCODE transcriptome data
  • Description: RNA profiling data sets generated by the Mouse ENCODE project.
  • BioProject: PRJNA66167
  • Publication: PMID 25409824
  • Analysis date: n/a

Bibliography

Variation

Alleles

Alleles of this type are documented at Mouse Genome Informatics  (MGI)

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General gene information

Markers

Gene Ontology Provided by MGI

Function Evidence Code Pubs
enables ATP binding ISS
Inferred from Sequence or Structural Similarity
more info
 
enables histone H2AS1 kinase activity IEA
Inferred from Electronic Annotation
more info
 
enables magnesium ion binding IDA
Inferred from Direct Assay
more info
PubMed 
enables magnesium ion binding ISS
Inferred from Sequence or Structural Similarity
more info
 
enables manganese ion binding IDA
Inferred from Direct Assay
more info
PubMed 
enables protein serine kinase activity IEA
Inferred from Electronic Annotation
more info
 
enables protein serine/threonine kinase activity IBA
Inferred from Biological aspect of Ancestor
more info
 
enables protein serine/threonine kinase activity IDA
Inferred from Direct Assay
more info
PubMed 
enables protein serine/threonine kinase activity ISS
Inferred from Sequence or Structural Similarity
more info
 
enables protein serine/threonine kinase activity TAS
Traceable Author Statement
more info
PubMed 
Process Evidence Code Pubs
involved_in chromatin remodeling IEA
Inferred from Electronic Annotation
more info
 
involved_in intracellular signal transduction NAS
Non-traceable Author Statement
more info
PubMed 
involved_in protein phosphorylation ISS
Inferred from Sequence or Structural Similarity
more info
 
involved_in sperm capacitation NAS
Non-traceable Author Statement
more info
PubMed 
involved_in spermatid development IBA
Inferred from Biological aspect of Ancestor
more info
 
involved_in spermatid development IMP
Inferred from Mutant Phenotype
more info
PubMed 
involved_in spermatogenesis IEP
Inferred from Expression Pattern
more info
PubMed 
Component Evidence Code Pubs
is_active_in sperm flagellum IDA
Inferred from Direct Assay
more info
PubMed 

General protein information

Preferred Names
testis-specific serine/threonine-protein kinase 3
Names
serine/threonine kinase 22C (spermiogenesis associated)
serine/threonine-protein kinase 22C
spermiogenesis associated serine/threonine kinase 22D
testis-specific kinase 3
testis-specific serine/threonine kinase 3b
NP_536690.1
XP_006503317.1
XP_030109549.1

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_080442.2NP_536690.1  testis-specific serine/threonine-protein kinase 3

    See identical proteins and their annotated locations for NP_536690.1

    Status: VALIDATED

    Source sequence(s)
    AK019840
    Consensus CDS
    CCDS18693.1
    UniProtKB/Swiss-Prot
    Q9D2E1, Q9JL98
    Related
    ENSMUSP00000000421.6, ENSMUST00000000421.6
    Conserved Domains (1) summary
    cd14163
    Location:9265
    STKc_TSSK3-like; Catalytic domain of testis-specific serine/threonine kinase 3 and similar proteins

RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000070.7 Reference GRCm39 C57BL/6J

    Range
    129382801..129385523 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_030253689.1XP_030109549.1  testis-specific serine/threonine-protein kinase 3 isoform X1

    UniProtKB/Swiss-Prot
    Q9D2E1, Q9JL98
    Conserved Domains (1) summary
    cd14163
    Location:9265
    STKc_TSSK3-like; Catalytic domain of testis-specific serine/threonine kinase 3 and similar proteins
  2. XM_006503254.4XP_006503317.1  testis-specific serine/threonine-protein kinase 3 isoform X2

    See identical proteins and their annotated locations for XP_006503317.1

    Conserved Domains (1) summary
    cl21453
    Location:1190
    PKc_like; Protein Kinases, catalytic domain