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RN7SL4P RNA, 7SL, cytoplasmic 4, pseudogene [ Homo sapiens (human) ]

Gene ID: 6030, updated on 10-Oct-2023

Summary

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Official Symbol
RN7SL4Pprovided by HGNC
Official Full Name
RNA, 7SL, cytoplasmic 4, pseudogeneprovided by HGNC
Primary source
HGNC:HGNC:10039
See related
Ensembl:ENSG00000263740 AllianceGenome:HGNC:10039
Gene type
pseudo
RefSeq status
INFERRED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Also known as
7L28; RN7SLP1; RN7SL427P
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Genomic context

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See RN7SL4P in Genome Data Viewer
Location:
3p25.1
Annotation release Status Assembly Chr Location
RS_2023_10 current GRCh38.p14 (GCF_000001405.40) 3 NC_000003.12 (15738515..15738786)
RS_2023_10 current T2T-CHM13v2.0 (GCF_009914755.1) 3 NC_060927.1 (15740969..15741240)
105.20220307 previous assembly GRCh37.p13 (GCF_000001405.25) 3 NC_000003.11 (15780022..15780293)

Chromosome 3 - NC_000003.12Genomic Context describing neighboring genes Neighboring gene 2-hydroxyacyl-CoA lyase 1 Neighboring gene H3K27ac hESC enhancer GRCh37_chr3:15642981-15643623 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr3:15688189-15688722 Neighboring gene Sharpr-MPRA regulatory region 6531 Neighboring gene biotinidase Neighboring gene Neanderthal introgressed variant-containing enhancer experimental_65637 Neighboring gene ankyrin repeat domain 28 Neighboring gene microRNA 3134 Neighboring gene uncharacterized LOC101927647 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 14108 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 19535 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 14109 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 19536 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 19537 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 19538 Neighboring gene H3K27ac hESC enhancer GRCh37_chr3:15887901-15888400 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 14110 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 14111 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 14112 Neighboring gene uncharacterized LOC107986064 Neighboring gene microRNA 563

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Human genes and pseudogenes for the 7SL RNA component of signal recognition particle. Ullu E, et al. EMBO J, 1984 Dec 20. PMID 6084597, Free PMC Article
  2. RNA-binding activity of TRIM25 is mediated by its PRY/SPRY domain and is required for ubiquitination. Choudhury NR, et al. BMC Biol, 2017 Nov 8. PMID 29117863, Free PMC Article

GeneRIFs: Gene References Into Functions

Phenotypes

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Review eQTL and phenotype association data in this region using PheGenI

Variation

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See studies and variants in dbVar

See Variation Viewer (GRCh37.p13)

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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Other Names

  • RNA, 7SL, cytoplasmic 427, pseudogene
  • RNA, 7SL, cytoplasmic, pseudogene 1

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

Genomic

  1. NG_002425.3 

    Range
    101..372
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2023_10

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000003.12 Reference GRCh38.p14 Primary Assembly

    Range
    15738515..15738786
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060927.1 Alternate T2T-CHM13v2.0

    Range
    15740969..15741240
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein
Heading Accession and Version

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