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Orco odorant receptor co-receptor [ Culex quinquefasciatus (southern house mosquito) ]

Gene ID: 6042040, updated on 22-May-2024

Summary

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Gene symbol
Orco
Gene description
odorant receptor co-receptor
See related
VectorBase:CQUJHB017442; EnsemblRapid:LOC6042040
Gene type
protein coding
RefSeq status
MODEL
Organism
Culex quinquefasciatus
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Nematocera; Culicoidea; Culicidae; Culicinae; Culicini; Culex; Culex
Orthologs
fruit fly all
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Genomic context

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See Orco in Genome Data Viewer
Location:
chromosome: 3
Exon count:
9
Annotation release Status Assembly Chr Location
100 current VPISU_Cqui_1.0_pri_paternal (GCF_015732765.1) 3 NC_051863.1 (46915625..46949854, complement)

Chromosome 3 - NC_051863.1Genomic Context describing neighboring genes Neighboring gene putative odorant receptor 85e Neighboring gene alpha-tocopherol transfer protein-like Neighboring gene transfer RNA alanine (anticodon AGC) Neighboring gene transfer RNA alanine (anticodon AGC) Neighboring gene transfer RNA alanine (anticodon AGC) Neighboring gene transfer RNA alanine (anticodon AGC) Neighboring gene ras-like protein family member 10B Neighboring gene fructose-bisphosphate aldolase

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_051863.1 Chromosome 3 Reference VPISU_Cqui_1.0_pri_paternal Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Identification and characterization of an odorant receptor from the West Nile virus mosquito, Culex quinquefasciatus. Xia Y, et al. Insect Biochem Mol Biol, 2006 Mar. PMID 16503478, Free PMC Article
  2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables odorant binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables olfactory receptor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in detection of chemical stimulus involved in sensory perception of smell IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in sensory perception of smell IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
odorant receptor coreceptor
Names
odorant receptor Or7
putative odorant receptor Or7

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Culex quinquefasciatus Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference VPISU_Cqui_1.0_pri_paternal Primary Assembly

Genomic

  1. NC_051863.1 Reference VPISU_Cqui_1.0_pri_paternal Primary Assembly

    Range
    46915625..46949854 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038262672.1 → XP_038118600.1  odorant receptor coreceptor

    UniProtKB/TrEMBL
    Q309I4
    Related
    XP_038118600.1, XM_038262672.1
    Conserved Domains (1) summary
    pfam02949
    Location:68 → 466
    7tm_6; 7tm Odorant receptor
Nucleotide Protein Strain
Heading Accession and Version

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