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hfq RNA chaperone Hfq [ Brevibacillus brevis ]

Gene ID: 61032709, updated on 3-Apr-2024

Summary

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Gene symbol
hfq
Gene description
RNA chaperone Hfq
Locus tag
EL268_RS12840
Gene type
protein coding
Organism
Brevibacillus brevis (strain: NCTC2611, serovar: not available: to be reported later, culture-collection: NCTC:2611, type-material: type strain of Brevibacillus brevis)
Lineage
Bacteria; Bacillota; Bacilli; Bacillales; Paenibacillaceae; Brevibacillus
Old locus tag
NCTC2611_02626
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Genomic context

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Location:
chromosome: 1

1 - NZ_LR134338.1Genomic Context describing neighboring genes Neighboring gene hypothetical protein Neighboring gene class I SAM-dependent methyltransferase Neighboring gene tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA Neighboring gene VOC family protein Neighboring gene multidrug effflux MFS transporter

Genomic regions, transcripts, and products

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Genomic Sequence:
NZ_LR134338.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Draft Genome Sequence of Brevibacillus brevis DZQ7, a Plant Growth-Promoting Rhizobacterium with Broad-Spectrum Antimicrobial Activity. Hou Q, et al. Genome Announc, 2015 Aug 20. PMID 26294619, Free PMC Article
  2. The RNA chaperone Hfq impacts growth, metabolism and production of virulence factors in Yersinia enterocolitica. Kakoschke T, et al. PLoS One, 2014. PMID 24454955, Free PMC Article
  3. Hfq regulates anti-oxidative ability in Vibrio parahaemolyticus. Su Z, et al. J Gen Appl Microbiol, 2010 Jun. PMID 20647674
  4. Structure of Pseudomonas aeruginosa Hfq protein. Nikulin A, et al. Acta Crystallogr D Biol Crystallogr, 2005 Feb. PMID 15681864

GeneRIFs: Gene References Into Functions

General protein information

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Preferred Names
RNA chaperone Hfq

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NZ_LR134338.1 Reference assembly

    Range
    2556012..2556251
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. WP_007719110.1 MULTISPECIES: RNA chaperone Hfq [Bacillales]

    See identical proteins and their annotated locations for WP_007719110.1

    UniProtKB/Swiss-Prot
    C0ZEY6
    UniProtKB/TrEMBL
    A0A0H0SSX3, A0A0J6EK38, A0A0K9YVX0, A0A0Q3SS35, A0A2P7V0Y3, A0A3M8CD11, A0A3M8CNK6, A0A4U2Y3X7, A0A542SKK8, A0AA92NPD5, J2PQ61, V6MAR1
    Conserved Domains (1) summary
    pfam17209
    Location:7 → 70
    Hfq; Hfq protein
Nucleotide Protein
Heading Accession and Version