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rpoE RNA polymerase sigma factor RpoE [ Pseudomonas fluorescens ]

Gene ID: 61637611, updated on 10-Oct-2024

Summary

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Gene symbol
rpoE
Gene description
RNA polymerase sigma factor RpoE
Locus tag
CPH89_RS18280
Gene type
protein coding
Organism
Pseudomonas fluorescens (strain: ATCC 13525, type-material: type strain of Pseudomonas fluorescens)
Lineage
Bacteria; Pseudomonadota; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas
Old locus tag
SAMN04488487_3751
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Genomic context

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Location:
chromosome: I

I - NZ_LT907842.1Genomic Context describing neighboring genes Neighboring gene succinate dehydrogenase assembly factor 2 Neighboring gene protein YgfX Neighboring gene L-aspartate oxidase Neighboring gene RseA family anti-sigma factor Neighboring gene MucB/RseB C-terminal domain-containing protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NZ_LT907842.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. The Gac-Rsm and SadB signal transduction pathways converge on AlgU to downregulate motility in Pseudomonas fluorescens. Martínez-Granero F, et al. PLoS One, 2012. PMID 22363726, Free PMC Article

GeneRIFs: Gene References Into Functions

General protein information

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Preferred Names
RNA polymerase sigma factor RpoE

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NZ_LT907842.1 Reference assembly

    Range
    3938698..3939279
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. WP_003172477.1 MULTISPECIES: RNA polymerase sigma factor RpoE [Gammaproteobacteria]

    See identical proteins and their annotated locations for WP_003172477.1

    UniProtKB/TrEMBL
    A0A031G6X8, A0A031IUR2, A0A083UHU1, A0A0A1HSG8, A0A0A1YZ80, A0A0A6DL10, A0A0B1Z081, A0A0E3GZY8, A0A0F4XIV9, A0A0H5A4K1, A0A0J6KDA6, A0A0J8G902, A0A0K1QNK4, A0A0L1MGY8, A0A0M4QHH5, A0A0Q4EZM6, A0A0Q6ZYK7, A0A0Q8A348, A0A0Q8CGS2, A0A0Q8J239, A0A0R2YI42, A0A0R3A700, A0A0R3AST3, A0A0R3ATK4, A0A0R3CCX3, A0A0S8ZB95, A0A0W0I384, A0A0W0N4F5, A0A127HYA2, A0A142N7T7, A0A172YXQ6, A0A176NGZ1, A0A176V3P0, A0A1B5DM73, A0A1D3JTK4, A0A1E4XA79, A0A1G4TQA0, A0A1H0F1A4, A0A1H0KCW8, A0A1H0VT43, A0A1H0YQ57, A0A1H1IMP5, A0A1H1RT47, A0A1H2AA91, A0A1H2FFP2, A0A1H2JE67, A0A1H2N9F2, A0A1H2P676, A0A1H3J557, A0A1H4PG75, A0A1H4Z8X3, A0A1H5H3C8, A0A1H8MTM7, A0A1I5INB7, A0A1K1SNQ9, A0A1K2CF31, A0A1N7GKN0, A0A1N7TVN4, A0A1Q4KFC0, A0A1R0GAV1, A0A1S2V4S3, A0A1V2KFL9, A0A1V3SF91, A0A1X7DGG3, A0A218ZY68, A0A223VPV7, A0A231GK29, A0A246G3T9, A0A257E177, A0A263NPV6, A0A270P9I3, A0A2A2E3Y8, A0A2G0VEK0, A0A2G0WUS0, A0A2G0Z9F8, A0A2G5LX54, A0A2G5M881, A0A2H2YJA2, A0A2K4FN81, A0A2K4GBL1, A0A2K4IDU1, A0A2K4KVH7, A0A2K9CHG0, A0A2M9G9G6, A0A2N1H476, A0A2N5EYX6, A0A2N7RJ05, A0A2N7YBG4, A0A2N7YNS3, A0A2N7Z0B4, A0A2N8DR42, A0A2N8EQZ4, A0A2P8LH89, A0A2R7NE24, A0A2S3VT58, A0A2S6FFW4, A0A2S9AZ86, A0A2S9BAZ4, A0A2S9D9P4, A0A2T4FR70, A0A2U1IPX6, A0A2U1RCM3, A0A2W7KZR4, A0A345RM10, A0A399PRB0, A0A3E1HQK1, A0A3G7Y9X7, A0A3G8C6W7, A0A3N7EH58, A0A3S1BEM6, A0A423F698, A0A481QSD6, A0A4P7PD75, A0A4R7UUM7, A0A4V5UJY2, A0A4Z0AZB6, A0A4Z0BC11, A0A560PFQ2, A0A560RMH2, A0A560T2R2, A0A5C4P6J2, A0A5C5NYV6, A0A5C5Q2F9, A0A5C5QM16, A0A5N7JT50, A0A5P1D700, A0A5R8QZ19, A0A6A7YTH8, A0A6I3WKA7, A0A6I6VPG0, A0A6N1CLP4, A0A7H8GQ81, A0A7S7MX81, A0A7U9GSR8, A0A7V8RJ05, A0A7X1DYR5, A0A7X1GGU1, A0A7X2RWP6, A0A7X9TSJ4, A0A7Y0VVM9, A0A7Y0W8Z9, A0A7Y0Z9I3, A0A7Y1F0D9, A0A7Y1MS08, A0A7Y2KVW5, A0A7Y5ZDX6, A0A7Y6EDH6, A0A7Y7ZQY9, A0A7Y7ZTL9, A0A7Y8AQQ3, A0A7Y8D0J4, A0A7Y8DJ58, A0A7Y8JVY4, A0A7Y8UVW4, A0A7Z0T3E7, A0A7Z2KRC4, A0A7Z2M5R5, A0A7Z3AGP3, A0A855K035, A0A855LMA5, A0A855QGZ4, A0A8H9YZA1, A0A923FB16, A0A923JFZ4, A0A9D5F6Q3, A0A9E6NT49, A0A9E6P4R1, A0A9X0YB15, A0A9X1BJ10, A0A9X4C7C4, A0AA96YD50, A0AAD1GME7, A0AAJ2W415, A0AAJ3EEU2, A0AAJ3GQV1, A0AAJ3MRH0, A0AAJ4B7Z5, A0AAJ4TR06, A0AAJ6KTF0, A0AAP2A9H8, A0AAP6YG31, A0AAP8NHW5, A0AAP9D5J5, A0AAQ2DFP2, A0AAQ3J5B8, C3KE31, F2KE50, G9HQL5, I4KCC9, J2MWP0, J2N0Q5, J2QFG7, J2SCG7, J2SD18, J2SZ45, J2U962, J2XKJ6, J2YW67, J3E0R0, J3F4B7, J3GME4, J3I9S2, J3IT64, Q3KGK1, S2FPA5, U1UXQ7, V8R9Q3, W2D699, W8PSW2
    Conserved Domains (1) summary
    PRK11923
    Location:1 → 192
    algU; RNA polymerase sigma factor AlgU; Provisional
Nucleotide Protein
Heading Accession and Version

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