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CPH89_RS29280 HU family DNA-binding protein [ Pseudomonas fluorescens ]

Gene ID: 61639759, updated on 10-Oct-2024

Summary

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Gene symbol
CPH89_RS29280
Gene description
HU family DNA-binding protein
Locus tag
CPH89_RS29280
Gene type
protein coding
Organism
Pseudomonas fluorescens (strain: ATCC 13525, type-material: type strain of Pseudomonas fluorescens)
Lineage
Bacteria; Pseudomonadota; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas
Old locus tag
SAMN04488487_6015
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Genomic context

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Location:
chromosome: I

I - NZ_LT907842.1Genomic Context describing neighboring genes Neighboring gene MFS transporter Neighboring gene SurA N-terminal domain-containing protein Neighboring gene endopeptidase La Neighboring gene ATP-dependent Clp protease ATP-binding subunit ClpX

Genomic regions, transcripts, and products

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Genomic Sequence:
NZ_LT907842.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Complete Genome Sequence of Pseudomonas sp. UK4, a Model Organism for Studies of Functional Amyloids in Pseudomonas. Dueholm MS, et al. Genome Announc, 2014 Sep 11. PMID 25212622, Free PMC Article
  2. Structure-based analysis of HU-DNA binding. Swinger KK, et al. J Mol Biol, 2007 Jan 26. PMID 17097674, Free PMC Article
  3. Functional evolution of bacterial histone-like HU proteins. Grove A. Curr Issues Mol Biol, 2011. PMID 20484776
  4. IHF and HU: flexible architects of bent DNA. Swinger KK, et al. Curr Opin Struct Biol, 2004 Feb. PMID 15102446

GeneRIFs: Gene References Into Functions

General protein information

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Preferred Names
HU family DNA-binding protein

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NZ_LT907842.1 Reference assembly

    Range
    6344769..6345041 complement
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    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. WP_003174819.1 MULTISPECIES: HU family DNA-binding protein [Pseudomonas]

    See identical proteins and their annotated locations for WP_003174819.1

    UniProtKB/TrEMBL
    A0A031ITT9, A0A0A1YZ47, A0A0H5AHX5, A0A0J8G2N6, A0A0Q4EF30, A0A0Q8CQ09, A0A0R2Y4C4, A0A0R2YH32, A0A0R3A3D2, A0A0R3B7I4, A0A0R3CVX2, A0A0W0HQY2, A0A0W0N7N7, A0A127I462, A0A172Z395, A0A176V542, A0A1B5D7I8, A0A1E4XI20, A0A1H0LQI8, A0A1H0N4P3, A0A1H2IIM2, A0A1H3P8I6, A0A1H4WKU8, A0A1N7U8K5, A0A1R0GGP0, A0A1S2UHC9, A0A1V2KE62, A0A218ZYR3, A0A223VVV7, A0A246FSY5, A0A257DZE2, A0A263NST0, A0A2G0W4I3, A0A2G0XAC9, A0A2G0YS37, A0A2G5LTT5, A0A2K9CZ67, A0A2M9GJC6, A0A2N5F938, A0A2N7XYK0, A0A2N7YSY3, A0A2P8LB99, A0A2S9AXX5, A0A2S9E7J7, A0A2T4G8C1, A0A3E1HZW6, A0A3G7YDQ0, A0A3G8C866, A0A3M3X399, A0A3M5UWY7, A0A3N7CRY1, A0A423FA55, A0A4V5UKE2, A0A5C5NL39, A0A5C5QKL6, A0A5F0JKW9, A0A5N7JUC1, A0A5P1D8K4, A0A5R8QWX8, A0A6I3WJE8, A0A6I6VWR9, A0A7S7S2B1, A0A7X1DYQ3, A0A7X2RWN2, A0A7X9TR16, A0A7Y0VVT0, A0A7Y0WNS2, A0A7Y0Z8L0, A0A7Y0ZCN4, A0A7Y1MQB5, A0A7Y7YZL3, A0A7Y8A3R4, A0A7Y8AFW5, A0A7Y8DP53, A0A7Y8ESE1, A0A7Y8FYA5, A0A7Y8UXF7, A0A7Z3AIU7, A0A855JWT8, A0A855QDK8, A0A8H9YSI8, A0A9Q3ZZI5, A0A9X1C3S6, A0AA89X7Y3, A0AAJ3EET2, A0AAJ3GWY6, A0AAJ3JKT5, A0AAJ4E9Y5, A0AAJ6KVN5, A0AAP7CUH2, A0AAP9D2D3, B7TX42, C3JYJ7, D0E8L2, I4KGA8, U1T1C3, W2D4R6
    Conserved Domains (1) summary
    cd13831
    Location:2 → 87
    HU; histone-like DNA-binding protein HU
Nucleotide Protein
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