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BCYRN1P1 brain cytoplasmic RNA 1, pseudogene 1 [ Homo sapiens (human) ]

Gene ID: 619, updated on 17-Sep-2024

Summary

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Official Symbol
BCYRN1P1provided by HGNC
Official Full Name
brain cytoplasmic RNA 1, pseudogene 1provided by HGNC
Primary source
HGNC:HGNC:1023
See related
AllianceGenome:HGNC:1023
Gene type
pseudo
RefSeq status
INFERRED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Also known as
BC200b
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Genomic context

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See BCYRN1P1 in Genome Data Viewer
Location:
Xq27.1
Annotation release Status Assembly Chr Location
RS_2024_08 current GRCh38.p14 (GCF_000001405.40) X NC_000023.11 (139720579..139720775)
RS_2024_08 current T2T-CHM13v2.0 (GCF_009914755.1) X NC_060947.1 (138032512..138032707)
RS_2024_09 previous assembly GRCh37.p13 (GCF_000001405.25) X NC_000023.10 (138802738..138802934)

Chromosome X - NC_000023.11Genomic Context describing neighboring genes Neighboring gene coagulation factor IX Neighboring gene MCF.2 cell line derived transforming sequence Neighboring gene small nucleolar RNA U13 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 21035 Neighboring gene Sharpr-MPRA regulatory region 14619 Neighboring gene ATPase phospholipid transporting 11C Neighboring gene RNA, U6atac small nuclear 23, pseudogene Neighboring gene microRNA 505

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Primary structure, neural-specific expression, and dendritic location of human BC200 RNA. Tiedge H, et al. J Neurosci, 1993 Jun. PMID 7684772, Free PMC Article
  2. BC200 RNA: a neural RNA polymerase III product encoded by a monomeric Alu element. Martignetti JA, et al. Proc Natl Acad Sci U S A, 1993 Dec 15. PMID 8265590, Free PMC Article

GeneRIFs: Gene References Into Functions

Phenotypes

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Review eQTL and phenotype association data in this region using PheGenI

Variation

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See studies and variants in dbVar

See Variation Viewer (GRCh37.p13)

See Variation Viewer (GRCh38)

General gene information

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NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

Genomic

  1. NG_003040.2 

    Range
    101..297
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2024_08

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000023.11 Reference GRCh38.p14 Primary Assembly

    Range
    139720579..139720775
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060947.1 Alternate T2T-CHM13v2.0

    Range
    138032512..138032707
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein
Heading Accession and Version

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