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EHI_042580 dolychil-diphosphooligosaccharide-- protein glycosyltransferase subunit, putative [ Entamoeba histolytica HM-1:IMSS ]

Gene ID: 6220752, updated on 17-May-2024

Summary

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Gene symbol
EHI_042580
Gene description
dolychil-diphosphooligosaccharide-- protein glycosyltransferase subunit, putative
Locus tag
EHI_042580
See related
AmoebaDB:EHI_042580; VEuPathDB:EHI_042580
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Entamoeba histolytica HM-1:IMSS (strain: HM-1:IMSS)
Lineage
Eukaryota; Amoebozoa; Evosea; Archamoebae; Mastigamoebida; Entamoebidae; Entamoeba
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Genomic context

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See EHI_042580 in Genome Data Viewer
Location:
chromosome: Unknown
Exon count:
1

NW_001916261.1Genomic Context describing neighboring genes Neighboring gene uncharacterized protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_001916261.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. The genome of the protist parasite Entamoeba histolytica. Loftus B, et al. Nature, 2005 Feb 24. PMID 15729342
  2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables oligosaccharyl transferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein glycosylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
dolychil-diphosphooligosaccharide-- protein glycosyltransferase subunit, putative
XP_001914631.1
  • encoded by transcript EHI_042580A
    predicted by EVM

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NW_001916261.1 Reference assembly

    Range
    591..1072
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_001914596.1 → XP_001914631.1  dolychil-diphosphooligosaccharide-- protein glycosyltransferase subunit, putative, partial [Entamoeba histolytica HM-1:IMSS]

    See identical proteins and their annotated locations for XP_001914631.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    A0A175K1A9, B1N615
    Conserved Domains (1) summary
    cl21590
    Location:11 → 160
    PMT_2; Dolichyl-phosphate-mannose-protein mannosyltransferase
Nucleotide Protein
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Gene LinkOut

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Molecular Biology Databases
Research Materials