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EHI_139570 peroxiredoxin, putative [ Entamoeba histolytica HM-1:IMSS ]

Gene ID: 6220762, updated on 17-May-2024

Summary

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Gene symbol
EHI_139570
Gene description
peroxiredoxin, putative
Locus tag
EHI_139570
See related
AmoebaDB:EHI_139570; VEuPathDB:EHI_139570
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Entamoeba histolytica HM-1:IMSS (strain: HM-1:IMSS)
Lineage
Eukaryota; Amoebozoa; Evosea; Archamoebae; Mastigamoebida; Entamoebidae; Entamoeba
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Genomic context

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See EHI_139570 in Genome Data Viewer
Location:
chromosome: Unknown
Exon count:
1

NW_001916321.1Genomic Context describing neighboring genes

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_001916321.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. The genome of the protist parasite Entamoeba histolytica. Loftus B, et al. Nature, 2005 Feb 24. PMID 15729342
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables thioredoxin peroxidase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in cell redox homeostasis IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in cellular response to stress IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in hydrogen peroxide catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in response to oxidative stress IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytosol IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
peroxiredoxin, putative
XP_001914639.1
  • encoded by transcript EHI_139570A
    Similar to SP:P19476: Putative peroxiredoxin (EC 1.11.1.15) (Thioredoxin peroxidae) (29 kDacysteine-rich surface antigen). taxon:5759 {Entamoeba histolytica;} / %id: 99.5 / coverage: *** This functional annotation is a direct result of community participation in an Entamoeba Annotation Jamboree.

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NW_001916321.1 Reference assembly

    Range
    412..992 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_001914604.1 → XP_001914639.1  peroxiredoxin, putative, partial [Entamoeba histolytica HM-1:IMSS]

    See identical proteins and their annotated locations for XP_001914639.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    B1N623, Q24841
    Conserved Domains (2) summary
    COG0450
    Location:1 → 186
    AhpC; Alkyl hydroperoxide reductase subunit AhpC (peroxiredoxin) [Defense mechanisms]
    cd03015
    Location:2 → 174
    PRX_Typ2cys; Peroxiredoxin (PRX) family, Typical 2-Cys PRX subfamily; PRXs are thiol-specific antioxidant (TSA) proteins, which confer a protective role in cells through its peroxidase activity by reducing hydrogen peroxide, peroxynitrite, and organic hydroperoxides. ...
Nucleotide Protein
Heading Accession and Version

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