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GT037_011297 rta1 like protein [ Alternaria burnsii ]

Gene ID: 62209522, updated on 7-Dec-2023

Summary

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Gene symbol
GT037_011297
Gene description
rta1 like protein
Locus tag
GT037_011297
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Alternaria burnsii (strain: CBS107.38, nat-host: Cuminum cyminum, type-material: culture from type material of Alternaria burnsii)
Lineage
Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina; Dothideomycetes; Pleosporomycetidae; Pleosporales; Pleosporineae; Pleosporaceae; Alternaria; Alternaria sect. Alternaria
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Genomic context

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See GT037_011297 in Genome Data Viewer
Location:
chromosome: Unknown
Exon count:
4

NW_024066137.1Genomic Context describing neighboring genes Neighboring gene uroporphyrinogen decarboxylase Neighboring gene dna mismatch repair protein Neighboring gene glycoside hydrolase family 10 protein Neighboring gene glycosyltransferase family 1 protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_024066137.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Gene Ontology Provided by RefSeq

Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
rta1 like protein

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NW_024066137.1 Reference assembly

    Range
    107828..108857 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038936344.1 → XP_038781016.1  rta1 like protein [Alternaria burnsii]

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    A0A8H7EAE3
    Conserved Domains (1) summary
    pfam04479
    Location:49 → 258
    RTA1; RTA1 like protein
Nucleotide Protein
Heading Accession and Version