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Gm6958 predicted gene 6958 [ Mus musculus (house mouse) ]

Gene ID: 629242, updated on 17-Aug-2024

Summary

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Official Symbol
Gm6958provided by MGI
Official Full Name
predicted gene 6958provided by MGI
Primary source
MGI:MGI:3779643
See related
AllianceGenome:MGI:3779643
Gene type
protein coding
RefSeq status
MODEL
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
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Genomic context

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See Gm6958 in Genome Data Viewer
Location:
16 C1.1; 16 33.74 cM
Exon count:
1
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCm39 (GCF_000001635.27) 16 NC_000082.7 (55781678..55785468)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 16 NC_000082.6 (55961315..55965048)

Chromosome 16 - NC_000082.7Genomic Context describing neighboring genes Neighboring gene STARR-positive B cell enhancer ABC_E7465 Neighboring gene centrosomal protein 97 Neighboring gene CapStarr-seq enhancer MGSCv37_chr16:55949146-55949379 Neighboring gene ribosomal protein L11 pseudogene Neighboring gene STARR-positive B cell enhancer ABC_E4179 Neighboring gene STARR-seq mESC enhancer starr_41049 Neighboring gene STARR-seq mESC enhancer starr_41050 Neighboring gene STARR-positive B cell enhancer ABC_E2466 Neighboring gene STARR-positive B cell enhancer ABC_E4180 Neighboring gene ribosomal protein L24 Neighboring gene zinc finger and BTB domain containing 11, opposite strand 1 Neighboring gene zinc finger and BTB domain containing 11

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. BGEM: an in situ hybridization database of gene expression in the embryonic and adult mouse nervous system. Magdaleno S, et al. PLoS Biol, 2006 Apr. PMID 16602821, Free PMC Article
  2. Antisense transcription in the mammalian transcriptome. Katayama S, et al. Science, 2005 Sep 2. PMID 16141073
  3. High-efficiency full-length cDNA cloning. Carninci P, et al. Methods Enzymol, 1999. PMID 10349636
  4. RIKEN integrated sequence analysis (RISA) system--384-format sequencing pipeline with 384 multicapillary sequencer. Shibata K, et al. Genome Res, 2000 Nov. PMID 11076861, Free PMC Article
  5. Normalization and subtraction of cap-trapper-selected cDNAs to prepare full-length cDNA libraries for rapid discovery of new genes. Carninci P, et al. Genome Res, 2000 Oct. PMID 11042159, Free PMC Article

See all (8) citations in PubMed

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by MGI

Function Evidence Code Pubs
enables molecular_function ND
No biological Data available
more info
  
Process Evidence Code Pubs
involved_in biological_process ND
No biological Data available
more info
  
Component Evidence Code Pubs
is_active_in cellular_component ND
No biological Data available
more info
  

General protein information

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Preferred Names
MLV-related proviral Env polyprotein-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000082.7 Reference GRCm39 C57BL/6J

    Range
    55781678..55785468
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_001480210.5 → XP_001480260.1  MLV-related proviral Env polyprotein-like

    See identical proteins and their annotated locations for XP_001480260.1

    Conserved Domains (1) summary
    pfam00429
    Location:5 → 298
    TLV_coat; ENV polyprotein (coat polyprotein)
Nucleotide Protein Strain
Heading Accession and Version

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