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msh1 MutS-like protein [ Tridentisis candelabrum ]

Gene ID: 6336099, updated on 13-Sep-2024

Summary

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Gene symbol
msh1
Gene description
MutS-like protein
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Tridentisis candelabrum (isolate: BAL208-1, common: bamboo coral)
Lineage
Eukaryota; Metazoa; Cnidaria; Anthozoa; Octocorallia; Scleralcyonacea; Keratoisididae; Tridentisis
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Genomic context

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Sequence:
Chromosome: MT; NC_010764.1 (13312..16293, complement)

Chromosome MT - NC_010764.1Genomic Context describing neighboring genes Neighboring gene NADH dehydrogenase subunit 4 Neighboring gene NADH dehydrogenase subunit 5 Neighboring gene NADH dehydrogenase subunit 2 Neighboring gene cytochrome c oxidase subunit III Neighboring gene ATP synthase F0 subunit 6

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_010764.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. The mitochondrial genome of a deep-sea bamboo coral (Cnidaria, Anthozoa, Octocorallia, Isididae): genome structure and putative origins of replication are not conserved among octocorals. Brugler MR, et al. J Mol Evol, 2008 Aug. PMID 18506498

GeneRIFs: Gene References Into Functions

General protein information

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Preferred Names
MutS-like protein

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_010764.1 Reference assembly

    Range
    13312..16293 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. YP_001936206.1 MutS-like protein (mitochondrion) [Tridentisis candelabrum]

    See identical proteins and their annotated locations for YP_001936206.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    B2X7F0
    Conserved Domains (5) summary
    COG0249
    Location:18 → 858
    MutS; DNA mismatch repair ATPase MutS [Replication, recombination and repair]
    cd00085
    Location:910 → 961
    HNHc; HNH nucleases; HNH endonuclease signature which is found in viral, prokaryotic, and eukaryotic proteins. The alignment includes members of the large group of homing endonucleases, yeast intron 1 protein, MutS, as well as bacterial colicins, pyocins, and ...
    pfam01624
    Location:18 → 148
    MutS_I; MutS domain I
    pfam05192
    Location:363 → 421
    MutS_III; MutS domain III
    cl21455
    Location:667 → 863
    P-loop_NTPase; P-loop containing Nucleoside Triphosphate Hydrolases
Nucleotide Protein
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Gene LinkOut

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