U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

hpf ribosome hibernation promotion factor [ Bacillus spizizenii ATCC 6633 = JCM 2499 ]

Gene ID: 64305287, discontinued on 23-Aug-2024
  • This record was discontinued.

Summary

Go to the top of the page Help
Gene symbol
hpf
Gene description
ribosome hibernation promotion factor
Locus tag
EO946_RS17715
Gene type
protein coding
Organism
Bacillus spizizenii ATCC 6633 = JCM 2499 (strain: ATCC 6633, sub-species: spizizenii, culture-collection: ATCC:6633)
Lineage
Bacteria; Bacillota; Bacilli; Bacillales; Bacillaceae; Bacillus
Also known as
yvyD
Old locus tag
EO946_17710
NEW
Try the new Gene table
Try the new Transcript table

Genomic regions, transcripts, and products

Go to the top of the page Help
Genomic Sequence:
NZ_CP034943.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

Related articles in PubMed

  1. Structure of the Bacillus subtilis hibernating 100S ribosome reveals the basis for 70S dimerization. Beckert B, et al. EMBO J, 2017 Jul 14. PMID 28468753, Free PMC Article
  2. The glucose and nitrogen starvation response of Bacillus licheniformis. Voigt B, et al. Proteomics, 2007 Feb. PMID 17274076
  3. Bacillus subtilis functional genomics: global characterization of the stringent response by proteome and transcriptome analysis. Eymann C, et al. J Bacteriol, 2002 May. PMID 11948165, Free PMC Article
  4. The yvyD gene of Bacillus subtilis is under dual control of sigmaB and sigmaH. Drzewiecki K, et al. J Bacteriol, 1998 Dec. PMID 9852014, Free PMC Article
  5. Expression of a small (p)ppGpp synthetase, YwaC, in the (p)ppGpp(0) mutant of Bacillus subtilis triggers YvyD-dependent dimerization of ribosome. Tagami K, et al. Microbiologyopen, 2012 Jun. PMID 22950019, Free PMC Article

GeneRIFs: Gene References Into Functions

General protein information

Go to the top of the page Help
Preferred Names
ribosome hibernation promotion factor

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NZ_CP034943.1 Reference assembly

    Range
    3433382..3433951 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. WP_003219736.1 ribosome hibernation promotion factor [Bacillus spizizenii]

    See identical proteins and their annotated locations for WP_003219736.1

    Conserved Domains (2) summary
    COG1544
    Location:1 → 111
    RaiA; Ribosome-associated translation inhibitor RaiA [Translation, ribosomal structure and biogenesis]
    pfam16321
    Location:128 → 184
    Ribosom_S30AE_C; Sigma 54 modulation/S30EA ribosomal protein C-terminus
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.