U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

CTDSPL2P1 CTDSPL2 pseudogene 1 [ Homo sapiens (human) ]

Gene ID: 643605, updated on 10-Oct-2023

Summary

Official Symbol
CTDSPL2P1provided by HGNC
Official Full Name
CTDSPL2 pseudogene 1provided by HGNC
Primary source
HGNC:HGNC:55031
See related
AllianceGenome:HGNC:55031
Gene type
pseudo
RefSeq status
INFERRED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

See CTDSPL2P1 in Genome Data Viewer
Location:
Xq22.1
Annotation release Status Assembly Chr Location
RS_2023_10 current GRCh38.p14 (GCF_000001405.40) X NC_000023.11 (100149586..100151535, complement)
RS_2023_10 current T2T-CHM13v2.0 (GCF_009914755.1) X NC_060947.1 (98591869..98593818, complement)
105.20220307 previous assembly GRCh37.p13 (GCF_000001405.25) X NC_000023.10 (99404584..99406533, complement)

Chromosome X - NC_000023.11Genomic Context describing neighboring genes Neighboring gene NANOG hESC enhancer GRCh37_chrX:99004673-99005174 Neighboring gene X-ray repair cross complementing 6 pseudogene 5 Neighboring gene H3K27ac hESC enhancer GRCh37_chrX:99090809-99091310 Neighboring gene B3GNT2 pseudogene 1 Neighboring gene H3K4me1 hESC enhancer GRCh37_chrX:99194631-99195245 Neighboring gene OCT4-NANOG hESC enhancer GRCh37_chrX:99325109-99326054 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chrX:99389825-99390366 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chrX:99390367-99390907 Neighboring gene ribosomal protein SA pseudogene 8 Neighboring gene OCT4-NANOG-H3K4me1 hESC enhancer GRCh37_chrX:99551001-99551552 Neighboring gene OCT4-NANOG-H3K4me1 hESC enhancer GRCh37_chrX:99551553-99552102 Neighboring gene protocadherin 19 Neighboring gene ReSE screen-validated silencer GRCh37_chrX:99606908-99607128 Neighboring gene OCT4-NANOG hESC enhancer GRCh37_chrX:99650039-99650643 Neighboring gene CDK7 strongly-dependent group 2 enhancer GRCh37_chrX:99657381-99658580

Genomic regions, transcripts, and products

General gene information

Markers

Other Names

  • CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase like 2 pseudogene
  • CTD small phosphatase like 2 pseudogene

NCBI Reference Sequences (RefSeq)

NEW Try the new Transcript table

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

Genomic

  1. NG_022626.2 

    Range
    41..1990
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2023_10

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000023.11 Reference GRCh38.p14 Primary Assembly

    Range
    100149586..100151535 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060947.1 Alternate T2T-CHM13v2.0

    Range
    98591869..98593818 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)