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RPL6P4 ribosomal protein L6 pseudogene 4 [ Homo sapiens (human) ]

Gene ID: 645054, updated on 17-Sep-2024

Summary

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Official Symbol
RPL6P4provided by HGNC
Official Full Name
ribosomal protein L6 pseudogene 4provided by HGNC
Primary source
HGNC:HGNC:36344
See related
Ensembl:ENSG00000226080 AllianceGenome:HGNC:36344
Gene type
pseudo
RefSeq status
INFERRED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Also known as
RPL6_3_194
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Genomic context

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See RPL6P4 in Genome Data Viewer
Location:
2p25.1
Annotation release Status Assembly Chr Location
RS_2024_08 current GRCh38.p14 (GCF_000001405.40) 2 NC_000002.12 (11102123..11103032)
RS_2024_08 current T2T-CHM13v2.0 (GCF_009914755.1) 2 NC_060926.1 (11133580..11134489)
RS_2024_09 previous assembly GRCh37.p13 (GCF_000001405.25) 2 NC_000002.11 (11242249..11243158)

Chromosome 2 - NC_000002.12Genomic Context describing neighboring genes Neighboring gene long intergenic non-protein coding RNA 1954 Neighboring gene NANOG-H3K27ac hESC enhancer GRCh37_chr2:11041995-11042565 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr2:11049105-11049605 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr2:11058947-11059850 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr2:11059851-11060754 Neighboring gene P300/CBP strongly-dependent group 1 enhancer GRCh37_chr2:11075650-11076849 Neighboring gene potassium voltage-gated channel modifier subfamily F member 1 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr2:11105924-11106900 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr2:11108135-11108636 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr2:11108637-11109136 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 15315 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 15316 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 15317 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr2:11245073-11245572 Neighboring gene Putative uncharacterized protein FLJ33534 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr2:11269908-11270408 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr2:11270409-11270909 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr2:11292424-11292924 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 11170 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 11171 Neighboring gene ciliary microtubule inner protein 5 Neighboring gene ReSE screen-validated silencer GRCh37_chr2:11298670-11298918 Neighboring gene solute carrier family 66 member 3

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Comparative analysis of processed ribosomal protein pseudogenes in four mammalian genomes. Balasubramanian S, et al. Genome Biol, 2009. PMID 19123937, Free PMC Article

GeneRIFs: Gene References Into Functions

Phenotypes

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Review eQTL and phenotype association data in this region using PheGenI

Variation

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See studies and variants in dbVar

See Variation Viewer (GRCh37.p13)

See Variation Viewer (GRCh38)

General gene information

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NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

Genomic

  1. NG_010981.3 

    Range
    101..1010
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2024_08

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000002.12 Reference GRCh38.p14 Primary Assembly

    Range
    11102123..11103032
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060926.1 Alternate T2T-CHM13v2.0

    Range
    11133580..11134489
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein
Heading Accession and Version

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