Tpbpa trophoblast specific protein alpha [Rattus norvegicus (Norway rat)] - Gene

Summary

Official Symbol: Tpbpaprovided by RGD
Official Full Name: trophoblast specific protein alphaprovided by RGD
Primary source: RGD:621454
See related: EnsemblRapid:ENSRNOG00000039975 AllianceGenome:RGD:621454
Gene type: protein coding
RefSeq status: PROVISIONAL
Organism: Rattus norvegicus
Lineage: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Rattus
Also known as: Tpbp
Expression: Restricted expression toward (RPKM 3.4) See more
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Genomic context

Location:: 17p14

Exon count:: 5

Annotation release	Status	Assembly	Chr	Location
RS_2024_02	current	GRCr8 (GCF_036323735.1)	17	NC_086035.1 (3804659..3807029)
RS_2023_06	previous assembly	mRatBN7.2 (GCF_015227675.2)	17	NC_051352.1 (3799046..3801416)
106	previous assembly	Rnor_6.0 (GCF_000001895.5)	17	NC_005116.4 (4165041..4167411)

Chromosome 17 - NC_086035.1 Genomic Context describing neighboring genes

Genomic regions, transcripts, and products

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Genomic Sequence:

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Expression

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See details

Project title: A rat RNA-Seq transcriptomic BodyMap across 11 organs and 4 developmental stages A rat RNA-Seq transcriptomic BodyMap across 11 organs and 4 developmental stages
Description: 320 RNA samples isolated from 11 organs (adrenal gland, brain, heart, kidney, liver, lung, muscle, spleen, thymus, and testes or uterus) from both sexes of Fischer 344 rats across four developmental stages (2-, 6-, 21-, and 104-weeks-old)
BioProject: PRJNA238328
Publication: PMID 24510058
Analysis date: Mon Jun 6 17:44:12 2016

Bibliography

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GeneRIFs: Gene References Into Functions

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General gene information

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Markers

RH128922 (e-PCR)
- UniSTS:212230

BI284841 (e-PCR)
- UniSTS:244308

BI285828 (e-PCR)
- UniSTS:244904

BI283846 (e-PCR)
- UniSTS:243675

Gene Ontology Provided by RGD

Process	Evidence Code	Pubs
involved_in female pregnancy	NAS Non-traceable Author Statement more info	PubMed

General protein information

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Preferred Names: trophoblast specific protein alpha

Names: spongiotrophoblast specific protein

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.