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These reference sequences exist independently of genome builds. Explain
These reference sequences are curated independently of the genome
annotation cycle, so their versions may not match the RefSeq versions in the current
genome build. Identify version mismatches by comparing the version of the RefSeq in
this section to the one reported in Genomic regions,
transcripts, and products above.
mRNA and Protein(s)
-
NM_001167740.2 → NP_001161212.1 histone-lysine N-methyltransferase SMYD3 isoform 1
See identical proteins and their annotated locations for NP_001161212.1
Status: VALIDATED
- Description
- Transcript Variant: This variant (1) represents the longer transcript and encodes the longer isoform (1).
- Source sequence(s)
-
AB057595, BI916760, BP231249
- Consensus CDS
-
CCDS53486.1
- UniProtKB/Swiss-Prot
- A8K0P0, B1AN38, Q86TL8, Q8N5Z6, Q96AI5, Q9H7B4
- Related
- ENSP00000419184.2, ENST00000490107.6
- Conserved Domains (2) summary
-
- pfam00856
Location:201 → 239
- SET; SET domain
- pfam01753
Location:49 → 87
- zf-MYND; MYND finger
-
NM_001375962.1 → NP_001362891.1 histone-lysine N-methyltransferase SMYD3 isoform 3
Status: VALIDATED
- Source sequence(s)
-
AL356583, AL358859, AL445468, AL512412
- Conserved Domains (2) summary
-
- pfam01753
Location:49 → 87
- zf-MYND; MYND finger
- cl40432
Location:5 → 234
- SET; SET (Su(var)3-9, Enhancer-of-zeste, Trithorax) domain superfamily
-
NM_001375963.1 → NP_001362892.1 histone-lysine N-methyltransferase SMYD3 isoform 2
Status: VALIDATED
- Source sequence(s)
-
AL358859, AL445468, AL512412
- Consensus CDS
-
CCDS31083.1
- Conserved Domains (2) summary
-
- pfam01753
Location:1 → 28
- zf-MYND; MYND finger
- cd19203
Location:39 → 209
- SET_SMYD3; SET domain (including post-SET domain) found in SET and MYND domain-containing protein 3 (SMYD3) and similar proteins
-
NM_001375965.1 → NP_001362894.1 histone-lysine N-methyltransferase SMYD3 isoform 4
Status: VALIDATED
- Source sequence(s)
-
AL445468, AL512412
- UniProtKB/TrEMBL
- A0A024R5P8, B3KN46
- Conserved Domains (1) summary
-
- cl40432
Location:1 → 79
- SET; SET (Su(var)3-9, Enhancer-of-zeste, Trithorax) domain superfamily
-
NM_001375966.1 → NP_001362895.1 histone-lysine N-methyltransferase SMYD3 isoform 5
Status: VALIDATED
- Source sequence(s)
-
AL445468, AL512412
- Conserved Domains (1) summary
-
- cl40432
Location:9 → 76
- SET; SET (Su(var)3-9, Enhancer-of-zeste, Trithorax) domain superfamily
-
NM_022743.3 → NP_073580.1 histone-lysine N-methyltransferase SMYD3 isoform 2
See identical proteins and their annotated locations for NP_073580.1
Status: VALIDATED
- Description
- Transcript Variant: This variant (2) differs in the 5' UTR, lacks a portion of the 5' coding region, and uses a downstream translational start codon, compared to variant 1. The encoded isoform (2) is shorter at the N-terminus, compared to isoform 1.
- Source sequence(s)
-
AK024733, AL356583, AL445468, AW173130
- Consensus CDS
-
CCDS31083.1
- UniProtKB/Swiss-Prot
-
Q9H7B4
- Related
- ENSP00000487434.1, ENST00000630181.2
- Conserved Domains (2) summary
-
- pfam01753
Location:1 → 28
- zf-MYND; MYND finger
- cd19203
Location:39 → 209
- SET_SMYD3; SET domain (including post-SET domain) found in SET and MYND domain-containing protein 3 (SMYD3) and similar proteins
The following sections contain reference sequences that belong to a
specific genome build. Explain
This section includes genomic Reference
Sequences (RefSeqs) from all assemblies on which this gene is annotated, such as
RefSeqs for chromosomes and scaffolds (contigs) from both reference and alternate
assemblies. Model RNAs and proteins are also reported here.
Reference GRCh38.p14 Primary Assembly
Genomic
-
NC_000001.11 Reference GRCh38.p14 Primary Assembly
- Range
-
245749347..246507279 complement
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
XM_047428020.1 → XP_047283976.1 histone-lysine N-methyltransferase SMYD3 isoform X2
-
XM_024449136.2 → XP_024304904.1 histone-lysine N-methyltransferase SMYD3 isoform X2
- Conserved Domains (2) summary
-
- pfam01753
Location:1 → 28
- zf-MYND; MYND finger
- cd19203
Location:39 → 209
- SET_SMYD3; SET domain (including post-SET domain) found in SET and MYND domain-containing protein 3 (SMYD3) and similar proteins
-
XM_047428021.1 → XP_047283977.1 histone-lysine N-methyltransferase SMYD3 isoform X2
-
XM_047428019.1 → XP_047283975.1 histone-lysine N-methyltransferase SMYD3 isoform X1
-
XM_017002094.3 → XP_016857583.1 histone-lysine N-methyltransferase SMYD3 isoform X5
- UniProtKB/TrEMBL
- A0A024R5P8, B3KN46
- Conserved Domains (1) summary
-
- cl40432
Location:1 → 79
- SET; SET (Su(var)3-9, Enhancer-of-zeste, Trithorax) domain superfamily
-
XM_024449162.2 → XP_024304930.1 histone-lysine N-methyltransferase SMYD3 isoform X5
- UniProtKB/TrEMBL
- A0A024R5P8, B3KN46
- Conserved Domains (1) summary
-
- cl40432
Location:1 → 79
- SET; SET (Su(var)3-9, Enhancer-of-zeste, Trithorax) domain superfamily
-
XM_047428022.1 → XP_047283978.1 histone-lysine N-methyltransferase SMYD3 isoform X5
- UniProtKB/TrEMBL
- A0A024R5P8, B3KN46
-
XM_011544261.4 → XP_011542563.1 histone-lysine N-methyltransferase SMYD3 isoform X5
See identical proteins and their annotated locations for XP_011542563.1
- UniProtKB/TrEMBL
- A0A024R5P8, B3KN46
- Related
-
ENST00000470510.5
- Conserved Domains (1) summary
-
- cl40432
Location:1 → 79
- SET; SET (Su(var)3-9, Enhancer-of-zeste, Trithorax) domain superfamily
-
XM_024449149.2 → XP_024304917.1 histone-lysine N-methyltransferase SMYD3 isoform X5
- UniProtKB/TrEMBL
- A0A024R5P8, B3KN46
- Conserved Domains (1) summary
-
- cl40432
Location:1 → 79
- SET; SET (Su(var)3-9, Enhancer-of-zeste, Trithorax) domain superfamily
-
XM_011544254.3 → XP_011542556.1 histone-lysine N-methyltransferase SMYD3 isoform X3
- Conserved Domains (1) summary
-
- pfam00856
Location:59 → 97
- SET; SET domain
-
XM_011544259.4 → XP_011542561.1 histone-lysine N-methyltransferase SMYD3 isoform X5
See identical proteins and their annotated locations for XP_011542561.1
- UniProtKB/TrEMBL
- A0A024R5P8, B3KN46
- Conserved Domains (1) summary
-
- cl40432
Location:1 → 79
- SET; SET (Su(var)3-9, Enhancer-of-zeste, Trithorax) domain superfamily
-
XM_024449141.2 → XP_024304909.1 histone-lysine N-methyltransferase SMYD3 isoform X5
- UniProtKB/TrEMBL
- A0A024R5P8, B3KN46
- Conserved Domains (1) summary
-
- cl40432
Location:1 → 79
- SET; SET (Su(var)3-9, Enhancer-of-zeste, Trithorax) domain superfamily
-
XM_011544257.2 → XP_011542559.1 histone-lysine N-methyltransferase SMYD3 isoform X4
See identical proteins and their annotated locations for XP_011542559.1
- UniProtKB/Swiss-Prot
-
Q9H7B4
- Conserved Domains (1) summary
-
- pfam00856
Location:31 → 69
- SET; SET domain
Alternate T2T-CHM13v2.0
Genomic
-
NC_060925.1 Alternate T2T-CHM13v2.0
- Range
-
245170078..245930104 complement
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
XM_054338273.1 → XP_054194248.1 histone-lysine N-methyltransferase SMYD3 isoform X2
-
XM_054338274.1 → XP_054194249.1 histone-lysine N-methyltransferase SMYD3 isoform X2
-
XM_054338275.1 → XP_054194250.1 histone-lysine N-methyltransferase SMYD3 isoform X2
-
XM_054338272.1 → XP_054194247.1 histone-lysine N-methyltransferase SMYD3 isoform X1
-
XM_054338277.1 → XP_054194252.1 histone-lysine N-methyltransferase SMYD3 isoform X5
- UniProtKB/TrEMBL
- A0A024R5P8, B3KN46
-
XM_054338278.1 → XP_054194253.1 histone-lysine N-methyltransferase SMYD3 isoform X5
- UniProtKB/TrEMBL
- A0A024R5P8, B3KN46
-
XM_054338279.1 → XP_054194254.1 histone-lysine N-methyltransferase SMYD3 isoform X5
- UniProtKB/TrEMBL
- A0A024R5P8, B3KN46
-
XM_054338276.1 → XP_054194251.1 histone-lysine N-methyltransferase SMYD3 isoform X4