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UHO2_07202 uncharacterized protein [ Ustilago hordei ]

Gene ID: 64867622, updated on 30-Nov-2023

Summary

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Gene symbol
UHO2_07202
Gene description
uncharacterized protein
Locus tag
UHO2_07202
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Ustilago hordei (strain: Uho2)
Lineage
Eukaryota; Fungi; Dikarya; Basidiomycota; Ustilaginomycotina; Ustilaginomycetes; Ustilaginales; Ustilaginaceae; Ustilago
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Genomic context

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See UHO2_07202 in Genome Data Viewer
Location:
chromosome: Unknown
Exon count:
1

NW_024545283.1Genomic Context describing neighboring genes Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_024545283.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA-binding transcription activator activity, RNA polymerase II-specific IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables RNA polymerase II cis-regulatory region sequence-specific DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
uncharacterized protein
XP_041414938.1
  • related to J kappa-recombination signal binding protein

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NW_024545283.1 Reference assembly

    Range
    316160..320623
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_041559004.1 → XP_041414938.1  uncharacterized protein UHO2_07202 [Ustilago hordei]

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    I2FNL3
    Conserved Domains (4) summary
    pfam09606
    Location:162 → 541
    Med15; ARC105 or Med15 subunit of Mediator complex non-fungal
    pfam09270
    Location:1005 → 1121
    BTD; Beta-trefoil DNA-binding domain
    pfam09271
    Location:780 → 941
    LAG1-DNAbind; LAG1, DNA binding
    cl15674
    Location:1386 → 1485
    IPT; Immunoglobulin-like fold, Plexins, Transcription factors (IPT). IPTs are also known as Transcription factor ImmunoGlobin (TIG) domains. They are present in intracellular transcription factors, cell surface receptors (such as plexins and scatter factor ...
Nucleotide Protein
Heading Accession and Version